| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238518
Identifier: 57238518
GI number: 57238518
Start: 1568077
End: 1568628
Strand: Reverse
Name: 57238518
Synonym: CJE1668
Alternate gene names: NA
Gene position: 1568628-1568077 (Counterclockwise)
Preceding gene: 57238519
Following gene: 57238517
Centisome position: 88.23
GC content: 26.81
Gene sequence:
>552_bases ATGCGTATAAAATTACCACATATTCCTTATATCGCAAATAAAATGATGTTAGATATAGCTAATTCTTCTTTTGTAGAAAT TAAAGATCAATTAGAAAAGCTTAAGGTATGTATAATAGAAGTTTTAGAGAAAGATATTCTAAATGAAAGAAAATTAGATG AAAGAGTAAAAGAGCTTTTAGAGCAACAAGAAGATGAAATGGAGCTTATGCAAGTAGATCGTAAAAATATGTTTTGGCTT GTGAAGAAAAAGTTAGCTCCTGAATTTAATGTGATTTTAGATTCTGAAGATAGACATAATCATCTAGCGCATCAAATTTT AGAAGAACTTGTAGAGAATGATTATATTAATTTTATAGTGAGTGAAAATAGAGTTAAAAATTTAATCTTTTCAAGCATAG AGTCTTATCTTAAAATTTATGAAAAACTTGAAGATGAGGTTTATGAGAAAATTAGCAATTATAAAACAAAACCTATTCCA GGTAGCGAAGAATACGATCTTATCTTTGAAAAACTCTATCAAGAAGAGCTCAGAAAAAAAGGTATGTTTTAA
Upstream 100 bases:
>100_bases GTAATTAGGTGATTAAAATAATGAAAATTTTTCATTTTTAACATTCTTTTACCAAAAATAAGCTATTATTTCAAACATTA TCAAATAAAAGGTTTTTAAG
Downstream 100 bases:
>100_bases TGAAGGCTTATATTTATTTAGAAAATGATATTTTTTTAAGTGCTAAGGCTTTTGGAAAGAGCGGTACTTTTTTTGGAGAG CTTGTATTTAACACTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKDILNERKLDERVKELLEQQEDEMELMQVDRKNMFWL VKKKLAPEFNVILDSEDRHNHLAHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP GSEEYDLIFEKLYQEELRKKGMF
Sequences:
>Translated_183_residues MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKDILNERKLDERVKELLEQQEDEMELMQVDRKNMFWL VKKKLAPEFNVILDSEDRHNHLAHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP GSEEYDLIFEKLYQEELRKKGMF >Mature_183_residues MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKDILNERKLDERVKELLEQQEDEMELMQVDRKNMFWL VKKKLAPEFNVILDSEDRHNHLAHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP GSEEYDLIFEKLYQEELRKKGMF
Specific function: Unknown
COG id: COG2952
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22057; Mature: 22057
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKDILNERKLDERVKELL CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHLAHQILEELVENDYINFIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHEEE SENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIPGSEEYDLIFEKLYQEELRKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC GMF CCC >Mature Secondary Structure MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKDILNERKLDERVKELL CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHLAHQILEELVENDYINFIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHEEE SENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIPGSEEYDLIFEKLYQEELRKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC GMF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA