| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is flgK [H]
Identifier: 57238490
GI number: 57238490
Start: 1539172
End: 1540998
Strand: Direct
Name: flgK [H]
Synonym: CJE1640
Alternate gene names: 57238490
Gene position: 1539172-1540998 (Clockwise)
Preceding gene: 57238489
Following gene: 57238491
Centisome position: 86.58
GC content: 33.83
Gene sequence:
>1827_bases ATGGGTATTTTTGGAACATTATACACAGGTGTTACAGGCTTAAAGGCAAGCGAAGTTCAAATCGCAACAACTGGAAATAA TATCTCAAATGCTAATGCAACTTTTTATACACGCCAAAGAGTGGTGCAAACTACAAATGGATATATTACAACAGGTGGAG TTCAAGTAGGCACAGGAACTGCTGTAGAAAGTATAGTGCGTTTGCATGATGAGTATTCTTACTATAAATTAAAAGGTGCA TCTACTCAACTAGAATATACTAAATATATAGCTTCCACTTTACAAGAAATTGCGCAGCGTTTTCCCGACTTACAAAATAC TGGAATTTTGCAAGATTTAGAAAATTATAACAAAGCTTGGAATGATTTTGCATCTAACCCCAACGAAAATGCCACAAAAA TAGCCCTTGTAAAAGCTTCTCAGACCTTAACAGAAAGCGTTAATAACACTTTTGCAACCTTAGATAAAATCCAAAAAAAA GTAAATGATGATATTAAAAATACAGTTGATGAGATTAATAGAATTGGCGAAGAAATTGCTACTATAAATAAACAAATTTA TGGACAAGAAGCCTTACCAACAGAACACGCAAATGAACTTAGGGATAGAAGAGATGAACTTGAGCTTACTCTTTCAAAGC TAGTTAGTGCAGTTGCAAGCAAAAATGAAATCAATCAAGACAATCGCCTTGATACAACCATCACTGATCCAGGACATCAA TACAATCTAAGTATAGAAGGTTTTAGTATAGTAGATGGAATAAATTTTCATCCTTTAAAGCTTGATTATGATGATAAAAA TAAATCTTATAGCATTTATTATGAAACTCCTGATGAAAAAGTTCGCGATCTTACTGCAAAAATTAGCGGTGGACAGCTTG GTGCTCAACTTGACTTACGCGGTAGAAACTATAGCAAAAGCGAAGGAAAATATGAAGATGGAATTATCCAAGGTTATATG GATTCTTTAGATACTTTTGCTAAGACCATGATCAATGAAACTAACAATCTTTATGCAAGTTCTGCGAAAAGTTCTGTTAC TTCTGATTATCTATCTGGGCTTAAGGGAGATATTCCTTTAGTTAATTACGACAGAACCATACAACCAGGAAGTTTTGATA TAGTCATTTATGATGATAAAGGCGATAAAAAACTCACCAAAACCATCACCATAGATGTAAATACAACCATGAATGATATC ATGCGTCAAATCAATGCTAATACAGATGATAATAACAATAAAAATTCAAACGATGATGTTGATGATCATATCAATGCAAG TTTTAGCTACGATGCAAAAACTGGAGATGGTTTATTTCAAATCAATGCAAAATCAGGTTTTAAGGTAGCCATTGAAGATA AGGGCACAAATTTCGCAGGTGCGTTTAGTATAGGTGGTTTTTTCAGCGGAACTGATGCAAGTAATATGAAAGTAAAAGAT TCCATCTTAAATGATCCAAGCACAGTAAGAGCAAGTTTAAGTGGGGTTGATAGTGGCAATGACATGGCAAATAAAATCAT CCAACTTCAATATGAAAAAGTTAATTTTTATAATGAAGATGGCACTATCGATAATCTTACCATGGAAGAATATTACCGCA AACTTACAGGTAAAATAGCCTCAGATGGTGAAAATAACAATGTCGTCAATTCAAGCAATGAAACTCTTTATAATTCTGTT TATAGCGAGTACCAATCTAAAAGTGGCGTAAATACAAATGAAGAATTAGCCGCCCTTATACAATATCAATCAAGTTACGG TGCAGCAGCAAAAATCGTCTCAACCGTAGATCAAATGCTTGATACCTTACTAGGGCTTAAATCTTAA
Upstream 100 bases:
>100_bases AAATAAAATGTTTGATATCAATGATGGAACAAATAATGCTTATGGAGATAAAAAGACAAATCCAGAGTCAATTTTCAAGA TCAATGTATAAGGATTTATA
Downstream 100 bases:
>100_bases GCTCTAGTAATATCAAATGAAAAATTTTATCCATCTTAAAGCTAAGCTCGATTTTTTAGCCAATCAAAAAAATACCAATC ATTCCCTTTTTGAAACTCCA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGA STQLEYTKYIASTLQEIAQRFPDLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKNEINQDNRLDTTITDPGHQ YNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYM DSLDTFAKTMINETNNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMNDI MRQINANTDDNNNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNFAGAFSIGGFFSGTDASNMKVKD SILNDPSTVRASLSGVDSGNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSV YSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS
Sequences:
>Translated_608_residues MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGA STQLEYTKYIASTLQEIAQRFPDLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKNEINQDNRLDTTITDPGHQ YNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYM DSLDTFAKTMINETNNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMNDI MRQINANTDDNNNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNFAGAFSIGGFFSGTDASNMKVKD SILNDPSTVRASLSGVDSGNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSV YSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS >Mature_607_residues GIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGAS TQLEYTKYIASTLQEIAQRFPDLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKKV NDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKNEINQDNRLDTTITDPGHQY NLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMD SLDTFAKTMINETNNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMNDIM RQINANTDDNNNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNFAGAFSIGGFFSGTDASNMKVKDS ILNDPSTVRASLSGVDSGNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVY SEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=256, Percent_Identity=26.953125, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR002371 - InterPro: IPR010810 [H]
Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]
EC number: NA
Molecular weight: Translated: 67068; Mature: 66936
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT CCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHCCCCCEEEECCEEECCCH AVESIVRLHDEYSYYKLKGASTQLEYTKYIASTLQEIAQRFPDLQNTGILQDLENYNKAW HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKKVNDDIKNTVDEINRIGEEIA HHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKNEINQDNRLDTTITDPGHQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCE YNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLR EEEEECCEEEECCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEC GRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINETNNLYASSAKSSVTSDYLSGLKGDIPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCE VNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMNDIMRQINANTDDNNNKNSNDDV ECCCCEECCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC DDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNFAGAFSIGGFFSGTDASNMKVKD HHHCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCEECCCCCCCCEEHH SILNDPSTVRASLSGVDSGNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIA HHCCCCHHHHHHHCCCCCCHHHHHHHEEEEEEEHEEECCCCCCCCCCHHHHHHHHHCCCC SDGENNNVVNSSNETLYNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQML CCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DTLLGLKS HHHHCCCC >Mature Secondary Structure GIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGT CCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHCCCCCEEEECCEEECCCH AVESIVRLHDEYSYYKLKGASTQLEYTKYIASTLQEIAQRFPDLQNTGILQDLENYNKAW HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH NDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKKVNDDIKNTVDEINRIGEEIA HHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKNEINQDNRLDTTITDPGHQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCE YNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKVRDLTAKISGGQLGAQLDLR EEEEECCEEEECCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEC GRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINETNNLYASSAKSSVTSDYLSGLKGDIPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCE VNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMNDIMRQINANTDDNNNKNSNDDV ECCCCEECCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCC DDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNFAGAFSIGGFFSGTDASNMKVKD HHHCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCEECCCCCCCCEEHH SILNDPSTVRASLSGVDSGNDMANKIIQLQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIA HHCCCCHHHHHHHCCCCCCHHHHHHHEEEEEEEHEEECCCCCCCCCCHHHHHHHHHCCCC SDGENNNVVNSSNETLYNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQML CCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DTLLGLKS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]