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The map label for this gene is kpsF [C]

Identifier: 57238467

GI number: 57238467

Start: 1521101

End: 1522048

Strand: Reverse

Name: kpsF [C]

Synonym: CJE1617

Alternate gene names: 57238467

Gene position: 1522048-1521101 (Counterclockwise)

Preceding gene: 57238468

Following gene: 57238466

Centisome position: 85.61

GC content: 36.6

Gene sequence:

>948_bases
ATGAATACTCTTGAAATAGCCAAAGAAGTCTTTGAAAAAGAAGCGCAAGCTATTTTGGATTTGGCTAAAAATTTAGATGA
AAATTTTAATCAAGCTGTGAATTTGATGCTAAATACCAAAGGGCGTTGCATAGTCAGTGGAATGGGTAAATCGGGTCATA
TAGGTGCTAAGATAGCAGCTACTTTAGCAAGTACAGGAACGCCAAGCTTTTTCATCCATCCAGGAGAGGCTTTGCATGGA
GATCTTGGAATGCTAACTCCTGAAGATGTTTTAATTGCTATTTCAAATTCAGGGGAAACTGAAGAAATTTTAAAAATCAT
TCCAGCTATAAAAAAGCGTAAAATTCCACTTATAGTAATGTGTGGTAAAAAAAATTCCACTCTTGTAAAGCAAAGCGATA
TATTTTTAAATATAGCTGTGGAAAAGGAAGCTTGTCCTTTGCAGCTTGCTCCTATGTCTTCGACAACCGCAACTTTGGTT
ATGGGGGATGCTTTAGCTGCTGCTTTGATGAAGGTAAGAAATTTCAAGCCTGATGATTTTGCCCTTTTTCATCCAGGGGG
GAGTTTGGGGCGTAAGCTTTTAACCAAGGTAAAAGATCTTATGGTTTCAAGTAACCTTCCTATAGTGCATCCTGATACTG
AATTTAATGATCTAGTTGATGTGATGACTAGTGGAAAGCTAGGGCTTTGTGTGGTACTTGAGAATGAAAAATTAGTGGGT
ATCATCACTGATGGGGATTTGCGTCGTGCTTTAAAGACAAGCGATAAACCAAGATTTGATTTTAGAGCCAAAGAAATCAT
GAGTACAAATCCTAAAGTAGTCGATGCTGATGCTATGGCAAGTGAAGCAGAAGAGATCATGTTAAAACATAAAATCAAAG
AAATTGTTGTATCTAAGGAAAATAAGATTATAGGTATTATTCAACTTTATGCGATAGGGAATGTATGA

Upstream 100 bases:

>100_bases
AGTAGATAGTGAGAATTTGCAAATTTTTTCAATGTTAACTCAAATTCTTTATCAAATTGCTATTGCAACCAATGTTGTGC
TTAATCTTTAAGGTTTAAAA

Downstream 100 bases:

>100_bases
AAATTTTTAGTATTTTTTTTTATTTATACAGGAGATTAATTCGTTTGTTTTCTTCATGCAAATTATTTGAGAGAAAAAAA
TGGATATTATTAGATAATTA

Product: arabinose-5-phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG
DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
IITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIVVSKENKIIGIIQLYAIGNV

Sequences:

>Translated_315_residues
MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG
DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
IITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIVVSKENKIIGIIQLYAIGNV
>Mature_315_residues
MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG
DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
IITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIVVSKENKIIGIIQLYAIGNV

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=308, Percent_Identity=45.7792207792208, Blast_Score=276, Evalue=9e-76,
Organism=Escherichia coli, GI87082151, Length=309, Percent_Identity=43.6893203883495, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34133; Mature: 34133

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCHHHHH
TLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVM
HHHCCCCCEEEECCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
CGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDF
ECCCCCCEEEECCEEEEEEEECCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCE
ALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
EEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEEEEECCEEEE
IITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIVVSKE
EEECHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
NKIIGIIQLYAIGNV
CCEEEEEEEEEECCC
>Mature Secondary Structure
MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCHHHHH
TLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVM
HHHCCCCCEEEECCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
CGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDF
ECCCCCCEEEECCEEEEEEEECCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCE
ALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLGLCVVLENEKLVG
EEECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCEEEEEEECCEEEE
IITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIVVSKE
EEECHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
NKIIGIIQLYAIGNV
CCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]