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The map label for this gene is nrfH [H]

Identifier: 57238400

GI number: 57238400

Start: 1443150

End: 1443665

Strand: Reverse

Name: nrfH [H]

Synonym: CJE1547

Alternate gene names: 57238400

Gene position: 1443665-1443150 (Counterclockwise)

Preceding gene: 57238402

Following gene: 57238399

Centisome position: 81.2

GC content: 34.5

Gene sequence:

>516_bases
ATGATAATTTTAAGGAGGAAAATTTTGAAGAAAACTTCGAATCTTTTTACTATTTTTCTTGTTTTGCTTTTTGTTTTCTT
TGCGGTTGGGTTTTATACTTTTTATAACGCTAAGGGCACATCTTATTTAAGCAATGCAAGTGAATCTTGTAATAACTGCC
ATATTATGAATGAAGTTTATAACGAATACATGGCAGGACCACACTCTCAAAAAGTCAAAGGCGAACCAAGAGCAACTTGT
GTGGATTGTCATTTGCCACATAATTTTGTAGCTAAGTGGATAGCTAAAGCGCAAAGTGGTTTAGGACATGCTTATGCTTT
TACTTTTAAACTTGATGAGTTGCCTACAAATTTGAGTGCGACTGAAAAAAGCAGAAAAATGGTGCAAGAAAACTGCATAC
GCTGTCATGCAGATTTTGCTCAAACAGCTATCAATGCTACAACAAATCCACATGCAGACAAGTCATTAAATTGTGCTTCT
TGTCATAAAGATGTTGGACATAAACACGGAATTTAA

Upstream 100 bases:

>100_bases
ATATATCTTTAAAATTATATTAAATTTATCTATGTTAAAATTAAAAAATTTATTTCTGGTAAATTCTGTGACATTGTTGT
TTCATTGAAGATTTTAAGAA

Downstream 100 bases:

>100_bases
TAAGGAGAAGATGAATGAAAAAAAATATTTTACGCTTAGGTATTGTCGTTTTGGTTTTACTTATAGCGGGAGTTTTATGG
CTAAATAATGATATCAATCA

Product: cytochrome C-type protein nrfH

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI

Sequences:

>Translated_171_residues
MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI
>Mature_171_residues
MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=184, Percent_Identity=32.0652173913043, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 19176; Mature: 19176

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHH
NEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSA
HHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCH
TEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCASCHKDVGHKHGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHH
NEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSA
HHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCH
TEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCASCHKDVGHKHGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]