| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238398
Identifier: 57238398
GI number: 57238398
Start: 1440614
End: 1441168
Strand: Reverse
Name: 57238398
Synonym: CJE1545
Alternate gene names: NA
Gene position: 1441168-1440614 (Counterclockwise)
Preceding gene: 57238399
Following gene: 57238392
Centisome position: 81.06
GC content: 29.73
Gene sequence:
>555_bases ATGATCAATAAAAATAAATTGTTTAGACAGGTTCATATCTATCTTAGTTTGTTCTTCTTGCCTTGTGCTTTGCTTTTTGC TTTAACGGGTATAGCGTATATTTTTGGTATTAATCAAGATGTGGGCTTAAAAGTTGAGCAGTATCAATTGTCAAAAGTTA TAGAAAGTGGTAAAGAAAGAGAAGCTTTAATAGAGTTTTTAAAAACAAATGGTTTAAAAGTGCCATCTAATACAAATATA ATTAAAAGTAAAGATAAAGGTATAACAATAGGTGGAACTCATTATAGTGCTAATATAACTCAAAATTCTACTAATGAATA CAGCATTACTCTAAAAACAAGATCTTTGCTTGGAGATATGATTATGCTTCATAAAGATAAGGGTGCTTGGTATTTTTCTG TGCTTAGTGTAGGTTTTGGTATTACTTTATTTATGCTTTATATTTCAGGGCTTATGATTACTTTGTTTGCAAATAAAAAA GATAGAAGTAAACAATTTGCAGTTCTTGGAGTAGGGGTTGTTGTAACTTTGCTTTTGGCTTATCTTGGCCTTTGA
Upstream 100 bases:
>100_bases TTTTATTTTAAAAAATATAAACTTTTTATTTAAAATTCACTTTTGCTTCACTTTGTTTTGTCAAAATATCACAAATTTTG ATAATCAAAAAGGAGTTAAA
Downstream 100 bases:
>100_bases TTTTTCCTAGCTTTTTAAGCTAGGTATTATTTATTTTTTTGTATAATTACACTTTACTTTATTGGACAGATGGGTGAGCG GCTGAAACCACACCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKVEQYQLSKVIESGKEREALIEFLKTNGLKVPSNTNI IKSKDKGITIGGTHYSANITQNSTNEYSITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK DRSKQFAVLGVGVVVTLLLAYLGL
Sequences:
>Translated_184_residues MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKVEQYQLSKVIESGKEREALIEFLKTNGLKVPSNTNI IKSKDKGITIGGTHYSANITQNSTNEYSITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK DRSKQFAVLGVGVVVTLLLAYLGL >Mature_184_residues MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKVEQYQLSKVIESGKEREALIEFLKTNGLKVPSNTNI IKSKDKGITIGGTHYSANITQNSTNEYSITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK DRSKQFAVLGVGVVVTLLLAYLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20496; Mature: 20496
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKVEQYQLSKVIESGKER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHH EALIEFLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQNSTNEYSITLKTRSLLGDM HHHHHHHHHCCEECCCCCCEEEECCCCEEECCCEEEEECCCCCCCEEEEEEEHHHHHHHH IMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKKDRSKQFAVLGVGVVVTLLLA HEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH YLGL HHCC >Mature Secondary Structure MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKVEQYQLSKVIESGKER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHH EALIEFLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQNSTNEYSITLKTRSLLGDM HHHHHHHHHCCEECCCCCCEEEECCCCEEECCCEEEEECCCCCCCEEEEEEEHHHHHHHH IMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKKDRSKQFAVLGVGVVVTLLLA HEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH YLGL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA