| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238376
Identifier: 57238376
GI number: 57238376
Start: 1410065
End: 1410970
Strand: Direct
Name: 57238376
Synonym: CJE1519
Alternate gene names: NA
Gene position: 1410065-1410970 (Clockwise)
Preceding gene: 57238375
Following gene: 57238377
Centisome position: 79.31
GC content: 29.25
Gene sequence:
>906_bases ATGAAAGTCTTAATCATAGGCTTTGGAAGCATAGGAAAAAAGCATTTTTTAGCCTTAAAAAATTTAAATCATGAAGTAAG TTTGCTTTCTTTAAGTGCTAAAAAAGAAGAATTTAAAAACACTCCAATTTATCGCTCTTTGAAAGAATGTGATTTAAACG AATTTGATCTTTTTATCATCGCAAATATCACTACGGAGCATTTTAACACCTTAAAAACTTTAGATGATCTTGTAAAAGAT AAAACCATACTCGTAGAAAAACCTTTATTTGAAAAAAGCCAAAATTTCACAAGTTTAAAAAATCACATTTATGTAGCATA TTTACTGCGTTTTCATCCTGTGATTGTCGCTTTAAAAAGGCTTTTAAAAGGTGAAAAAATTTATTTTGCTAGTTTGGTTT GTAATTCTTATTTGCCCCATTGGAGGGCTTTAGACTACAGGCAAAATTACAGCGCTAAAAAAGAGCTAGGTGGTGGGGTT TTACTCGATCTTTCTCATGAAATCGATCTAGCCTTTTTTCTTTTTGGAAACTTAGAGCTTATATACTCCCAAAATGCTAA AATTTCAGAGCTTGACATAACAAGCGATGATTTTGCCTTTTTGGTTTTAAAAAATTCACAAAAAGCTAAAATTCATATAG AATTAGACTATTTTTCTAAATTCAACAAAAGAGAAATGACCATCCATACTTTAGAAAAAAGCTTTAAAGCCGATTTGATA AACAATAAAATCGAAATTTATCACAAAGATCAAAGTCAAAAAATCTTAAATTTTGAAAACGATACGATAAAAACCCTTCA AAATTTACATCAAGCAATCTTTGAAAAAGACAAAGAACTTTGCGATCTTAAGCAAGCTTTAAAAGTACTTGAACTTTGTG ATGAAGTAAGGAAAAAAAATGGCTGA
Upstream 100 bases:
>100_bases TTGTATTGCAAAAAGGCAAAGTAAATACCTATATCATCAACGATTATTGGATTGACATTGGAAGGCCAGATGAGTTTTTA AAAGCCAATGAGGATTTTAA
Downstream 100 bases:
>100_bases AATTTTATGCACCATTTGTGCTAGAGGTGGAAGTAAAGGCGTTAAAAACAAAAATATTAGAAAGATTAACGAACTTGAAA TGATAGCTTATAGCATCATA
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Dehydrogenase; Dehydrogenase-Like Protein; Oxidoreductase Gfo/Idh/MocA Family; Oxidoreductase Family Protein; Oxidoreductase-Like; Flagellin Protein PtmF; Oxidoreductase GFO/Idh/MocA Family Protein; Oxidoreductase-Like Protein; GFO/IDH/MOCA Family Oxidoreductase
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFIIANITTEHFNTLKTLDDLVKD KTILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKRLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV LLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREMTIHTLEKSFKADLI NNKIEIYHKDQSQKILNFENDTIKTLQNLHQAIFEKDKELCDLKQALKVLELCDEVRKKNG
Sequences:
>Translated_301_residues MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFIIANITTEHFNTLKTLDDLVKD KTILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKRLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV LLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREMTIHTLEKSFKADLI NNKIEIYHKDQSQKILNFENDTIKTLQNLHQAIFEKDKELCDLKQALKVLELCDEVRKKNG >Mature_301_residues MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFIIANITTEHFNTLKTLDDLVKD KTILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKRLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV LLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREMTIHTLEKSFKADLI NNKIEIYHKDQSQKILNFENDTIKTLQNLHQAIFEKDKELCDLKQALKVLELCDEVRKKNG
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35006; Mature: 35006
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFII CEEEEEECCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCHHHHHHHCCCCCCCEEEE ANITTEHFNTLKTLDDLVKDKTILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKR EECCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGVLLDLSHEIDLAFFLFGNLEL HHCCCCEEEHHHHHHHCCCCHHCCCHHCCCCHHHHCCCCEEEEECCCCCEEEEEECCEEE IYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREMTIHTLEKSFKADLI EEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHC NNKIEIYHKDQSQKILNFENDTIKTLQNLHQAIFEKDKELCDLKQALKVLELCDEVRKKN CCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFII CEEEEEECCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCHHHHHHHCCCCCCCEEEE ANITTEHFNTLKTLDDLVKDKTILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKR EECCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGVLLDLSHEIDLAFFLFGNLEL HHCCCCEEEHHHHHHHCCCCHHCCCHHCCCCHHHHCCCCEEEEECCCCCEEEEEECCEEE IYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREMTIHTLEKSFKADLI EEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHC NNKIEIYHKDQSQKILNFENDTIKTLQNLHQAIFEKDKELCDLKQALKVLELCDEVRKKN CCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA