| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238325
Identifier: 57238325
GI number: 57238325
Start: 1364505
End: 1365485
Strand: Reverse
Name: 57238325
Synonym: CJE1466
Alternate gene names: NA
Gene position: 1365485-1364505 (Counterclockwise)
Preceding gene: 57238326
Following gene: 57238324
Centisome position: 76.81
GC content: 31.7
Gene sequence:
>981_bases ATGTCAAAAGACAAAATAATTACAGATGCCCCTGATGTGCAAGGGCTTAGAGTTTTAGTTTTATCTCGTGCTATGGAAAG TTTAGGAAAAGAAGCTATTCAAGCAGGATTTTTAACAAGTATTTCAGGTCTTAAAGGTGGAACTAGAGAAAGTCAAAAAC TAAGCCCAATCAACGATAGAGATTATGAAGAAATCAACGCAGTGGGCAAAAAAACTTCAGCTACTGTAAATATGAATTTA CTTTATAAATTTGTTAAAGATGGTAATTTAGAAAGCTATGAGGGGGTAAATTATTTAGAAAAAGCTTTTGAAGAAAATGA AGAAGTTTTTATCATCGTAGAGATTAATGATGAGAGAAAAACCATGCTTAAAATCAAAATGAAATTAACAGGCTTTGAGC TTCAAAGCGAAGCAAATAATAAATTCAGTGCAAATATCACAGCAGAAAAAATAGGCGAAGCTAAAGACATCACACCTTTT AGATTTGAAGAAAGTCAAAATATAGAACACAGTACAAAAGCTTTAAATGTGGGCGATGTGATGAGTGATAAAAAAGGTAA AATTATTTATTTTTACCCAAAAGAAAGCACACTTGAAAAACCAGAATTAAACGATGAAAGAATGGTTTATGTTTTTGATG AGGTGCGAGGTGTTGTACCAAATCCTAGTACACAAACTTTTAACGAAAACAATGAATTTATAACCACAAAAGAAGCTGAT AAAGTTTGGGAAAAAGAAAATGATGAAAATATTATTCATGAAAGCAAAACCGAACCAGAACAAGGGCAGACTTATGAGGA ATTAAAAGGAAAAACATTATATTTTTATCCAAACGCCTTAACACTTCTTTATCCTGCAAATGAAGATATTCGCAAAAAAT ACACCATAGATCAAAGCTCAGGCATAGCAAGTGAAGCCACAATGCAAACTTTTTTAAATGGAAAATTTAGCGATGCTTTA AGAAAAGGAGGTAAAAAATGA
Upstream 100 bases:
>100_bases ATACAAAAATATAGTTTTATGAAAAATATCTCTTAATACGCATTTTAACGCCTTAAACTTTTTATAAAATCTCCTTACAT TACTTATATAAGGAGAAAAG
Downstream 100 bases:
>100_bases AATTCAATGACTTTTTAAAACAACATTCTTTAAGAGAAAAAGAAATTTTAATCGAAGGTATTGATGAAAAATTCACAATT CGCCAACTTTCTATGCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSKDKIITDAPDVQGLRVLVLSRAMESLGKEAIQAGFLTSISGLKGGTRESQKLSPINDRDYEEINAVGKKTSATVNMNL LYKFVKDGNLESYEGVNYLEKAFEENEEVFIIVEINDERKTMLKIKMKLTGFELQSEANNKFSANITAEKIGEAKDITPF RFEESQNIEHSTKALNVGDVMSDKKGKIIYFYPKESTLEKPELNDERMVYVFDEVRGVVPNPSTQTFNENNEFITTKEAD KVWEKENDENIIHESKTEPEQGQTYEELKGKTLYFYPNALTLLYPANEDIRKKYTIDQSSGIASEATMQTFLNGKFSDAL RKGGKK
Sequences:
>Translated_326_residues MSKDKIITDAPDVQGLRVLVLSRAMESLGKEAIQAGFLTSISGLKGGTRESQKLSPINDRDYEEINAVGKKTSATVNMNL LYKFVKDGNLESYEGVNYLEKAFEENEEVFIIVEINDERKTMLKIKMKLTGFELQSEANNKFSANITAEKIGEAKDITPF RFEESQNIEHSTKALNVGDVMSDKKGKIIYFYPKESTLEKPELNDERMVYVFDEVRGVVPNPSTQTFNENNEFITTKEAD KVWEKENDENIIHESKTEPEQGQTYEELKGKTLYFYPNALTLLYPANEDIRKKYTIDQSSGIASEATMQTFLNGKFSDAL RKGGKK >Mature_325_residues SKDKIITDAPDVQGLRVLVLSRAMESLGKEAIQAGFLTSISGLKGGTRESQKLSPINDRDYEEINAVGKKTSATVNMNLL YKFVKDGNLESYEGVNYLEKAFEENEEVFIIVEINDERKTMLKIKMKLTGFELQSEANNKFSANITAEKIGEAKDITPFR FEESQNIEHSTKALNVGDVMSDKKGKIIYFYPKESTLEKPELNDERMVYVFDEVRGVVPNPSTQTFNENNEFITTKEADK VWEKENDENIIHESKTEPEQGQTYEELKGKTLYFYPNALTLLYPANEDIRKKYTIDQSSGIASEATMQTFLNGKFSDALR KGGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36975; Mature: 36844
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDKIITDAPDVQGLRVLVLSRAMESLGKEAIQAGFLTSISGLKGGTRESQKLSPINDR CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DYEEINAVGKKTSATVNMNLLYKFVKDGNLESYEGVNYLEKAFEENEEVFIIVEINDERK CHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCE TMLKIKMKLTGFELQSEANNKFSANITAEKIGEAKDITPFRFEESQNIEHSTKALNVGDV EEEEEEEEEECEEECCCCCCEEEEEEEHHHCCCCCCCCCEEECCCCCCCHHHHEEECHHH MSDKKGKIIYFYPKESTLEKPELNDERMVYVFDEVRGVVPNPSTQTFNENNEFITTKEAD CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCEEEECCHH KVWEKENDENIIHESKTEPEQGQTYEELKGKTLYFYPNALTLLYPANEDIRKKYTIDQSS HHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCHHHHHEEECCCCC GIASEATMQTFLNGKFSDALRKGGKK CCCHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure SKDKIITDAPDVQGLRVLVLSRAMESLGKEAIQAGFLTSISGLKGGTRESQKLSPINDR CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DYEEINAVGKKTSATVNMNLLYKFVKDGNLESYEGVNYLEKAFEENEEVFIIVEINDERK CHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCE TMLKIKMKLTGFELQSEANNKFSANITAEKIGEAKDITPFRFEESQNIEHSTKALNVGDV EEEEEEEEEECEEECCCCCCEEEEEEEHHHCCCCCCCCCEEECCCCCCCHHHHEEECHHH MSDKKGKIIYFYPKESTLEKPELNDERMVYVFDEVRGVVPNPSTQTFNENNEFITTKEAD CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCEEEECCHH KVWEKENDENIIHESKTEPEQGQTYEELKGKTLYFYPNALTLLYPANEDIRKKYTIDQSS HHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCEEEEEECCCHHHHHEEECCCCC GIASEATMQTFLNGKFSDALRKGGKK CCCHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA