Click here to switch to the map view.

The map label for this gene is oorB [H]

Identifier: 57238263

GI number: 57238263

Start: 579123

End: 579968

Strand: Direct

Name: oorB [H]

Synonym: CJE0641

Alternate gene names: 57238263

Gene position: 579123-579968 (Clockwise)

Preceding gene: 57238264

Following gene: 57238262

Centisome position: 32.57

GC content: 34.63

Gene sequence:

>846_bases
ATGGCTTTTAATTATGATGAATATCTAAGAGTAGATAAAATGCCTACTCAATGGTGTTGGGGATGTGGCGATGGTGTTGT
TTTAAAATGTATTATCCGCGCGATAGAAAAACTTGGTTGGAATATGGATGATGTTTGTCTTGTTTCGGGTATAGGTTGTA
GTGGCAGAATGAGTTCTTATGTAAATTGCAATACAGTTCATACTACTCATGGTAGAGCAATAGCTTATGCAACAGGCATT
AAACTAGCCAATCCTAGTAAACATGTTATTGTAGTAAGTGGAGATGGGGATACTTTGGCAATTGGTGGAAATCATACCAT
ACATGGTTGTCGCAGAAATATTGATTTAACACATATTGTAATCAATAATTTCATCTATGGACTTACAAATTCTCAAACAA
GTCCAACTACTCCAAAAGGTTTTTATACAGTAACAGCTCAATTTGGAAATATTGATCCCAATTTTGATGCGTGTGAATTA
ACTAAAGCTGCAGGAGCTTCTTTTGTGGCAAGGGGTAATGTGATAGAAGCTAATAAGCTTGAAAATTTAATTTATAAGGC
TTTAGCGCATAAGGGTTATAGTTTTGTAGATGTTTTTTCAAATTGTCATATCAATCTAGGCAGAAAAAACAAAATGGGCG
AAGCTGTAGCTATGCTTGATTGGATTAAAAATCGTGTTGTGGATAAAGCTAAATTTGAAAGCATGGATTTTGAAGAAAGA
AAAGATAAATTTCCAACAGGAATTTTACATGAAGATAATTCTCAGCCAGAATACTGCCACGCTTATGAAGAAGTACGTCG
TGCAGCCAAAGAAAAAAGAATGGTGGATTTAGGAGCTTTAAAATGA

Upstream 100 bases:

>100_bases
AAGAGTAACTTCGCGTCGCGATTTTATTAGTTTGCACCGTGCAAATGGTCGTCCTATCACTCCAAGTGAAATTATTGCTA
AGGTAAAGGAGAATATATAA

Downstream 100 bases:

>100_bases
AATATCAATTAAGATTTGGCGGTGAAGGCGGACAAGGTGTTATCACCGCAGGAGAAATTTTAGCAGAAGCAGCCATTAAA
GAAGGTCGTCAAGCTTTTAA

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorB

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGI
KLANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEER
KDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK

Sequences:

>Translated_281_residues
MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGI
KLANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEER
KDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK
>Mature_280_residues
AFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIK
LANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACELT
KAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEERK
DKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 31208; Mature: 31077

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSY
CCCCHHHHHEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIV
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCEEEHHHCCCCCCEEE
INNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACELTKAAGASFVARGNVIEANKL
EHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCEEECCCEECHHHH
ENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEER
HHHHHHHHHHCCCCEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK
HHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDVCLVSGIGCSGRMSSY
CCCHHHHHEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIGGNHTIHGCRRNIDLTHIV
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCEEEHHHCCCCCCEEE
INNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACELTKAAGASFVARGNVIEANKL
EHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCEEECCCEECHHHH
ENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWIKNRVVDKAKFESMDFEER
HHHHHHHHHHCCCCEEEHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK
HHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]