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The map label for this gene is fliD [H]

Identifier: 57238252

GI number: 57238252

Start: 588990

End: 590900

Strand: Direct

Name: fliD [H]

Synonym: CJE0652

Alternate gene names: 57238252

Gene position: 588990-590900 (Clockwise)

Preceding gene: 57238253

Following gene: 57238251

Centisome position: 33.13

GC content: 32.44

Gene sequence:

>1911_bases
ATGGCATTTGGTAGTCTATCTAGTTTAGGATTTGGTTCTGGGGTTTTAACTCAAGATACTATAGATAAATTAAAAGAAGC
AGAGCAAAAAGCTCGTATTGATCCTTATACTAAAAAAATTGAAGAAAATACAACCAAACAAAAAGATTTAACAGAAATCA
AAACTAAATTACTAAGTTTTCAGACGGCTGTTTCATCATTAGCCGATGCTACGGTTTTTGCGAAAAGAAAAGTTGTAGGA
AGTATTAGCGATAATCCTCCAGCAAGTCTTACAGTTAATTCGGGTGTTGCTTTACAAAGCATGAATATCAATGTTACTCA
ACTTGCACAAAAAGATGTGTATCAAAGCAAAGGATTAGCAAATGACAGTGGTTTTATTAATGCAAATTTAACTGGAACCA
CCGATCTTACTTTTTTTTCAAATGGCAAAGAATATACTGTTACGGTAGATAAAAACACAACCTATAGAGATTTAGCTGAT
AAAATTAATGAAGCTAGTGGAGGAGAGATTGTTGCTAAGATTGTAAACACAGGAGAGAAAGGCACTCCTTACCGCTTAAC
TTTAACCAGCAAAGAAACAGGCGAAGACAGTGCGATAAGTTTCTATGCAGGAAAAAAAGATGCGCAGGGTCAGTATAAAA
GTGATTCAGAGGCAGAAGAAATATTCAAAAGTCTTGGATGGGAATTAGATACAGCGAGTTCTATTGATCCAGCTAAGGAT
AAAAAAGGTTATGGTATTAAGGATCCTTCTTTGCATATCCAAACTGCGCAAAATGCAGAATTTACACTTGATGGTATTAA
GATGTTTAGATCAAGTAACACTGTTACCGATCTTGGTGTAGGAATGACTTTAACTTTAAATAAAACAGGTGAAATTAATT
TTGATGTACAGCAAGATTTTGAAGGTGTGACAAAAGCCATGCAAGATTTGGTGGATGCTTATAATGATTTAGTAACCAAT
CTTAATGCTGCAACTGACTATAATAGTGAAACTGGAACAAAAGGAACTTTACAAGGCATCAGTGAAGTAAATTCAATACG
CTCAAGCATTCTTGCTGATTTGTTTGATTCTCAAGTTGTTGATGGAACTACTGAAGATGCAAATGGTAATAAAGTGAACA
CTAAGGTTATGCTTTCTATGCAGGATTTTGGCTTAAGTTTAAATGATGCAGGCACTTTGAGTTTTGATTCTTCTAAATTT
GAACAAAAAGTTAAAGAAGATCCAGACTCTACTGAAAGTTTTTTTTCAAATATTACTAAATACGAAGACATTAATCACAC
AGGAGAGGTAATTAAGACAGGAAGTTTAAGTAAATATCTTACCAATGGTTTAGAATTTAAACCAGGAGATTTTACTATAG
TTTTTAATAATCAAACATATGATTTATCTAAAAATTCTGATGGTACTAATTTTAAATTAACAGGGAAAACAGAGGAAGAA
TTGCTTCAAAATTTAGCTAATCATATAAACAGTAAAGGTATTGAAGGCTTAAAAGTTAAGGTTGAATCCTATAATCAAAA
CAATGTTACAGGGTTTAGGTTGAATTTTAGTGGAGATGGTAGTTCGGATTTTTCAATCAAAGGAAATGCTAGCATTCTCA
AGGAATTAGGTTTGTCTGATGTAAATATAACCTCGAAGCCTATAGAAGGTAAAGGTATTTTTTCAAAATTAAAAGCCACG
TTGCAAGAGATGACTGGAAAAGATGGTTCAATTACAAAATATGATGAGAGTTTGACAAATGATATTAAATCATTAAATAC
CTCTAAAGACTCGACTCAGGCTATGATTGATACAAGATATGATACAATGGCGAATCAATGGTTGCAATATGAGAGTATTT
TAAATAAACTCAATCAACAGCTAAATACTGTGACTAATATGATTAATGCGGCAAACAATTCTAATAATTAA

Upstream 100 bases:

>100_bases
CTGGAAGGGAAATCCGTCAAATTCCTAGTGAAGAAGCTATGAGATTAGCTGAGTATTTTAGGGATGTGATAGGAATGATA
TTTGATAAGGAGAGTTAAAA

Downstream 100 bases:

>100_bases
GGATAAAAAAGATGCAAAATAATTTAGCCTATAATGCTTATTCTCAAAATCAAGTGGGGATAGAGTCTCCGCAAAAACTT
ATTGAAATGCTTTATGAGGG

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVG
SISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLANDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLAD
KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEAEEIFKSLGWELDTASSIDPAKD
KKGYGIKDPSLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTN
LNAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGTLSFDSSKF
EQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEE
LLQNLANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGDGSSDFSIKGNASILKELGLSDVNITSKPIEGKGIFSKLKAT
LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLNQQLNTVTNMINAANNSNN

Sequences:

>Translated_636_residues
MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVG
SISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLANDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLAD
KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEAEEIFKSLGWELDTASSIDPAKD
KKGYGIKDPSLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTN
LNAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGTLSFDSSKF
EQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEE
LLQNLANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGDGSSDFSIKGNASILKELGLSDVNITSKPIEGKGIFSKLKAT
LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLNQQLNTVTNMINAANNSNN
>Mature_635_residues
AFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGS
ISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLANDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLADK
INEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEAEEIFKSLGWELDTASSIDPAKDK
KGYGIKDPSLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNL
NAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGTLSFDSSKFE
QKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEEL
LQNLANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGDGSSDFSIKGNASILKELGLSDVNITSKPIEGKGIFSKLKATL
QEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLNQQLNTVTNMINAANNSNN

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=421, Percent_Identity=26.603325415677, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 69239; Mature: 69108

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
QTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC
NDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLADKINEASGGEIVAKIVNTGEK
CCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCEEHHHHHCCCC
GTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEAEEIFKSLGWELDTASSIDPAKD
CCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
KKGYGIKDPSLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDF
CCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCEEEECCCEEEEECCCCCEECCHHHHH
EGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DGTTEDANGNKVNTKVMLSMQDFGLSLNDAGTLSFDSSKFEQKVKEDPDSTESFFSNITK
CCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHH
YEDINHTGEVIKTGSLSKYLTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEE
HHCCCCCCCCEECCCHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCCCEEEEECCCHHH
LLQNLANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGDGSSDFSIKGNASILKELGLSD
HHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCEEECCCHHHHHHCCCCC
VNITSKPIEGKGIFSKLKATLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRY
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DTMANQWLQYESILNKLNQQLNTVTNMINAANNSNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
QTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC
NDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLADKINEASGGEIVAKIVNTGEK
CCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCEEHHHHHCCCC
GTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEAEEIFKSLGWELDTASSIDPAKD
CCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
KKGYGIKDPSLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDF
CCCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCEEEECCCEEEEECCCCCEECCHHHHH
EGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DGTTEDANGNKVNTKVMLSMQDFGLSLNDAGTLSFDSSKFEQKVKEDPDSTESFFSNITK
CCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHH
YEDINHTGEVIKTGSLSKYLTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEE
HHCCCCCCCCEECCCHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCCCEEEEECCCHHH
LLQNLANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGDGSSDFSIKGNASILKELGLSD
HHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCEEECCCHHHHHHCCCCC
VNITSKPIEGKGIFSKLKATLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRY
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
DTMANQWLQYESILNKLNQQLNTVTNMINAANNSNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]