| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238236
Identifier: 57238236
GI number: 57238236
Start: 605904
End: 606971
Strand: Direct
Name: 57238236
Synonym: CJE0670
Alternate gene names: NA
Gene position: 605904-606971 (Clockwise)
Preceding gene: 57238237
Following gene: 57238235
Centisome position: 34.08
GC content: 27.34
Gene sequence:
>1068_bases ATGACATCGTTTGAAAAAATCAAAAAAGAAGAACAAGAAAATAATAAGTTAAATGTTTTAATACTTGGAAAAACAGGTGC AGGAAAAAGTACTTTAATTAATACCGTATTTGGTGAAAAAGTAGCCAAAACAGATAGCGGCTCTCCAATCACTGCTAATT TAAACAAATATGAAAAAGATGGACTTTGTATATATGATAGTAAAGGTCTTGAAATAAAAGATGACAAAGATATTGATAAC TTAAAACAATTTATCGAAGATCAAAAAGCAAAAGAACCTTCAGATCAAATTTATTTGGTATGGTTTTGTATTTGTGAAGC AAATCGAAGAATAGAACCACAAGAAAAAGAATTAATAAAATTTTTAAAATCTGAAAAATTTTGTACAATATTGGTTATCA CTAAAGCTCAACAAGATAAAGATGAAAATGGTTGTAGTTTTAAGGATATTGTTAAAAAAGAGCTTGAATTAGATGATGAA AAAATAGAAAGAGTAAGAGCTATAGCAATTGAAGATGATGAAGGAAATGTTAAAAAACTTTTAGGTATTAAAGAGTTAGT CAATAAAACTTATTGTTTTTTAAATGAAGGACAAAAAAATGCTTTTGCAAGAAAACAACAATATGATAAAGATTTAAAAA GAGAAGCTTGCAAAGAAAAGGCTCAAGATAAGATTAAATATTATGCAGGATTATCTTCAACTGTAGCATTATCTCCTATA CCTTTTTCTGACTTTCCTCTTATTGCAACCAATCAATGTGCTATGATTTATCATATTAGTATGATTTACGAGCTTAATTT AAGCAGTAAAGATGATGCTTTAAAAATTTTAACAGCTTTACTTGCTACAGGTGTTACAGGATTTGCAGTCAAAACGCTTG CTACAGGTCTTATGAAATTTATTCCTGGTGTCAATTTTATAGGTGGAGCTATTAACGCAACAGTAGCCTACAACGCCACT AAAAAAATCGGAGAATTTTATATAGATTATTTAGATGAACATTTTGAAGATATACAAAATGGAAAAAAACTTGATTTTGA ATTTAAAAATTTATCAATAGAAAAATAA
Upstream 100 bases:
>100_bases GGGGATTTGATAAAATACAAAGTTAAAAATTTTAAAAACAAGGAGAAAATATGGCAAATAATGAGTTTAATTTCAACAAT GGATCTTTTTTAACGAGATA
Downstream 100 bases:
>100_bases GCAATAAATCATGATTAAGCCTATTCCAAAATTTCAAAAATGTATAAAATGTGGCAAAAGTTTTTTAGCTAAACCTAAAA GCGATGCTTTAAATACTTTA
Product: GTP-binding protein
Products: NA
Alternate protein names: GTPase; GTPase Protein; GTPase Family
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTSFEKIKKEEQENNKLNVLILGKTGAGKSTLINTVFGEKVAKTDSGSPITANLNKYEKDGLCIYDSKGLEIKDDKDIDN LKQFIEDQKAKEPSDQIYLVWFCICEANRRIEPQEKELIKFLKSEKFCTILVITKAQQDKDENGCSFKDIVKKELELDDE KIERVRAIAIEDDEGNVKKLLGIKELVNKTYCFLNEGQKNAFARKQQYDKDLKREACKEKAQDKIKYYAGLSSTVALSPI PFSDFPLIATNQCAMIYHISMIYELNLSSKDDALKILTALLATGVTGFAVKTLATGLMKFIPGVNFIGGAINATVAYNAT KKIGEFYIDYLDEHFEDIQNGKKLDFEFKNLSIEK
Sequences:
>Translated_355_residues MTSFEKIKKEEQENNKLNVLILGKTGAGKSTLINTVFGEKVAKTDSGSPITANLNKYEKDGLCIYDSKGLEIKDDKDIDN LKQFIEDQKAKEPSDQIYLVWFCICEANRRIEPQEKELIKFLKSEKFCTILVITKAQQDKDENGCSFKDIVKKELELDDE KIERVRAIAIEDDEGNVKKLLGIKELVNKTYCFLNEGQKNAFARKQQYDKDLKREACKEKAQDKIKYYAGLSSTVALSPI PFSDFPLIATNQCAMIYHISMIYELNLSSKDDALKILTALLATGVTGFAVKTLATGLMKFIPGVNFIGGAINATVAYNAT KKIGEFYIDYLDEHFEDIQNGKKLDFEFKNLSIEK >Mature_354_residues TSFEKIKKEEQENNKLNVLILGKTGAGKSTLINTVFGEKVAKTDSGSPITANLNKYEKDGLCIYDSKGLEIKDDKDIDNL KQFIEDQKAKEPSDQIYLVWFCICEANRRIEPQEKELIKFLKSEKFCTILVITKAQQDKDENGCSFKDIVKKELELDDEK IERVRAIAIEDDEGNVKKLLGIKELVNKTYCFLNEGQKNAFARKQQYDKDLKREACKEKAQDKIKYYAGLSSTVALSPIP FSDFPLIATNQCAMIYHISMIYELNLSSKDDALKILTALLATGVTGFAVKTLATGLMKFIPGVNFIGGAINATVAYNATK KIGEFYIDYLDEHFEDIQNGKKLDFEFKNLSIEK
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40136; Mature: 40004
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFEKIKKEEQENNKLNVLILGKTGAGKSTLINTVFGEKVAKTDSGSPITANLNKYEKD CCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC GLCIYDSKGLEIKDDKDIDNLKQFIEDQKAKEPSDQIYLVWFCICEANRRIEPQEKELIK CEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH FLKSEKFCTILVITKAQQDKDENGCSFKDIVKKELELDDEKIERVRAIAIEDDEGNVKKL HHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHHHH LGIKELVNKTYCFLNEGQKNAFARKQQYDKDLKREACKEKAQDKIKYYAGLSSTVALSPI HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC PFSDFPLIATNQCAMIYHISMIYELNLSSKDDALKILTALLATGVTGFAVKTLATGLMKF CCCCCCEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IPGVNFIGGAINATVAYNATKKIGEFYIDYLDEHFEDIQNGKKLDFEFKNLSIEK CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure TSFEKIKKEEQENNKLNVLILGKTGAGKSTLINTVFGEKVAKTDSGSPITANLNKYEKD CCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC GLCIYDSKGLEIKDDKDIDNLKQFIEDQKAKEPSDQIYLVWFCICEANRRIEPQEKELIK CEEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHH FLKSEKFCTILVITKAQQDKDENGCSFKDIVKKELELDDEKIERVRAIAIEDDEGNVKKL HHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHHHH LGIKELVNKTYCFLNEGQKNAFARKQQYDKDLKREACKEKAQDKIKYYAGLSSTVALSPI HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC PFSDFPLIATNQCAMIYHISMIYELNLSSKDDALKILTALLATGVTGFAVKTLATGLMKF CCCCCCEEECCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IPGVNFIGGAINATVAYNATKKIGEFYIDYLDEHFEDIQNGKKLDFEFKNLSIEK CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA