BacMap

Definition	Campylobacter jejuni RM1221, complete genome.
Accession	NC_003912
Length	1,777,831

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The map label for this gene is 57238203

Identifier: 57238203

GI number: 57238203

Start: 634800

End: 636143

Strand: Reverse

Name: 57238203

Synonym: CJE0704

Alternate gene names: NA

Gene position: 636143-634800 (Counterclockwise)

Preceding gene: 57238202

Following gene: 57238209

Centisome position: 35.78

GC content: 31.32

Gene sequence:

>1344_bases
ATGCAAAGACAAACATGGAGTAGCACACTAACTTATATTCTAACAGTTGCTGGAGCAACCATAGGATTTGGAGCAACTTG
GCGTTTTCCCTATCTTGTAGGAGAAAATGGTGGCGGTGCTTATGTATTAGTTTTTTGTATAGCCATGATTATCATAGGCA
TTCCTGTTATTTTAGTTGAAAATGTCATAGGCAGAAAAGCGATGACAAATAGCGTAGATGCTTTCAAACAAAAATGGCAA
AGTATTGGATATATGGGACTTTTAGGAAGCTTTGGCATAATGGCTTACTACATGGTACTTGGAGGATGGGTTTTAGTTTA
TATTTGGGAATTAACCCTAGGGAATTTTAGTCTTGCCAATGTAGTAAGCAAAGAATTTACTCATCAGTTTTTTAACGACA
AAATAGCCTTCAATCCTTTAGGAGTTGGTATTTTTACCACTGTTTTTGTAATTATTAATTATATTATTTTAAAAAGAGGC
ATTATAGATGGTATAGAAAAATCCGTAAAATTTTTAATGCCTTTATTATTTATCTGCCTTATTATTGTTGTAGGACGCAA
TTTAACCCTTGATGGAGCTATGGCTGGAGTTAAATTTTATCTTGAACCTGATTTTAGTAAAATTTTATCACCAAAACTTT
TAATCGATGTTTTAGGACAAGTCTTTTTTGCTTTATCCCTAGGTTTTGGGGTAATGATAACACTTTCATCTCATCTTAAT
AAAAATGAAAATATGGCAAAAACCGCTATTTATACAGGGGTTTTAAATACTATCATAGCTGTTTTGGCTGGTTTTATGAT
TTTTCCAGCACTTTTCTCAGCGGGACTTGCTCCAGATAGCGGGCCTTCTTTGGTTTTTGAAACTTTACCTATAGCATTTT
CTCATATCCATTTTGGCACTATTGTGTGTATTTTATTTTTTGTCTTACTCTTGATTGCAGCTTTAACCACAAGCTTGCCA
ATTTATCAAGTTATTATTAGCGTATTAGAAGAAAAATTTAAATATTCTAAAAATCTTTCTATTAACCTAACTCTAGGGTT
TATCTTCATACTTGGCAATCTTCCTTGTATTCTAACTTATGGGCCTTGGCGTGATATTGTTATCATCAAAGGAAAAAACA
TTTTTGATAGTTTTGATTTCATTAGTGGAAATATTTTGTTTGTTTTAACTGCATTTTTTTGCTGTATTTATGTAGGTTGG
ATTTTAGGCAAACAAGAAAGTCTAAAAGAACTTAGCAATAACAATACACTTAAAAGTTCATGGTTTGGAATTTGGTTTTA
TTATGTAAAATATATAGTACCTTTGATTATTTTAATCATTTTTATCTATGGAATTTTAAACTGA

Upstream 100 bases:

>100_bases
ACAAACGCTTAAAAAATACTTACGATATAAGCTATATGGATAGCTTATAAGTTTTTAAAGTTATTTTTAGGTAAAATAAT
TCTTTTTCGAAAGGATAATC

Downstream 100 bases:

>100_bases
TTTTTTAAATTTATATCTCTCTAACATAGTGGAATTTCCTAAAATTCCACCTTGATGTATATAAAGCAATGGTTTTTTCC
ACTCTTGTTTTAATGCTATA

Product: sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN

Sequences:

>Translated_447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN
>Mature_447_residues
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQ
SIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLP
IYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGW
ILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI188528618, Length=490, Percent_Identity=24.8979591836735, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI4507043, Length=379, Percent_Identity=27.7044854881267, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI7657587, Length=461, Percent_Identity=25.5965292841649, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI21361581, Length=459, Percent_Identity=24.1830065359477, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI197276623, Length=501, Percent_Identity=25.9481037924152, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI54607094, Length=501, Percent_Identity=25.9481037924152, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI171184408, Length=452, Percent_Identity=25, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI171184406, Length=452, Percent_Identity=25, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI171184404, Length=452, Percent_Identity=25, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI5032097, Length=502, Percent_Identity=23.1075697211155, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI33354281, Length=374, Percent_Identity=27.0053475935829, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI289191351, Length=397, Percent_Identity=26.1964735516373, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI4557046, Length=397, Percent_Identity=26.1964735516373, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI289191377, Length=397, Percent_Identity=26.1964735516373, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI58219014, Length=366, Percent_Identity=27.8688524590164, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4507041, Length=384, Percent_Identity=25, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI51468073, Length=292, Percent_Identity=25.6849315068493, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI218563756, Length=495, Percent_Identity=22.2222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI6005715, Length=526, Percent_Identity=24.1444866920152, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI194018524, Length=295, Percent_Identity=27.1186440677966, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI11181770, Length=295, Percent_Identity=26.7796610169492, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI134304856, Length=383, Percent_Identity=25.8485639686684, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI67782317, Length=355, Percent_Identity=25.3521126760563, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI67782313, Length=355, Percent_Identity=25.3521126760563, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI67782315, Length=355, Percent_Identity=25.3521126760563, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI92859670, Length=271, Percent_Identity=26.1992619926199, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI218563758, Length=270, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI289191353, Length=210, Percent_Identity=30, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI21361693, Length=109, Percent_Identity=37.6146788990826, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI12408638, Length=273, Percent_Identity=22.7106227106227, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI300360519, Length=271, Percent_Identity=24.3542435424354, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI197276625, Length=140, Percent_Identity=29.2857142857143, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI133952791, Length=536, Percent_Identity=24.2537313432836, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25146584, Length=504, Percent_Identity=24.2063492063492, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17555248, Length=420, Percent_Identity=25.7142857142857, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17554804, Length=481, Percent_Identity=23.7006237006237, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71995588, Length=500, Percent_Identity=24, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI115534083, Length=517, Percent_Identity=20.889748549323, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71998244, Length=362, Percent_Identity=24.0331491712707, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24762620, Length=491, Percent_Identity=27.9022403258656, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24661428, Length=496, Percent_Identity=26.008064516129, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI45550877, Length=471, Percent_Identity=27.1762208067941, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI45551183, Length=424, Percent_Identity=26.6509433962264, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI17136952, Length=481, Percent_Identity=22.8690228690229, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24652942, Length=487, Percent_Identity=22.5872689938398, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI45551088, Length=487, Percent_Identity=22.5872689938398, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI19921936, Length=494, Percent_Identity=22.8744939271255, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281364394, Length=481, Percent_Identity=22.8690228690229, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28574704, Length=481, Percent_Identity=22.8690228690229, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17136950, Length=481, Percent_Identity=22.8690228690229, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28574702, Length=481, Percent_Identity=22.8690228690229, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281364136, Length=519, Percent_Identity=24.6628131021195, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24639514, Length=499, Percent_Identity=23.0460921843687, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI221329674, Length=499, Percent_Identity=23.0460921843687, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI281365034, Length=499, Percent_Identity=23.4468937875752, Blast_Score=114, Evalue=9e-26,
Organism=Drosophila melanogaster, GI281363702, Length=486, Percent_Identity=23.4567901234568, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24639516, Length=292, Percent_Identity=27.3972602739726, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24639853, Length=515, Percent_Identity=22.7184466019417, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24655079, Length=294, Percent_Identity=27.5510204081633, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24582567, Length=444, Percent_Identity=25, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI19921352, Length=504, Percent_Identity=22.2222222222222, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24584353, Length=504, Percent_Identity=22.2222222222222, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24654186, Length=311, Percent_Identity=27.6527331189711, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI281363700, Length=297, Percent_Identity=25.5892255892256, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24582569, Length=406, Percent_Identity=23.1527093596059, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 49696; Mature: 49696

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVE
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLGNFSLAN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRGIIDGIEKSVKFLMPLLFICL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
HHHHCCCCEECHHHHCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCHHHEEEEHHHCC
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IVCILFFVLLLIAALTTSLPIYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEE
GPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGWILGKQESLKELSNNNTLKSS
CCCCCEEEEECCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
WFGIWFYYVKYIVPLIILIIFIYGILN
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVFCIAMIIIGIPVILVE
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGGWVLVYIWELTLGNFSLAN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRGIIDGIEKSVKFLMPLLFICL
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVFFALSLGFGVMITLSSHLN
HHHHCCCCEECHHHHCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCHHHEEEEHHHCC
KNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSGPSLVFETLPIAFSHIHFGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IVCILFFVLLLIAALTTSLPIYQVIISVLEEKFKYSKNLSINLTLGFIFILGNLPCILTY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEEEEE
GPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVGWILGKQESLKELSNNNTLKSS
CCCCCEEEEECCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
WFGIWFYYVKYIVPLIILIIFIYGILN
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]