| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238175
Identifier: 57238175
GI number: 57238175
Start: 1344926
End: 1345579
Strand: Direct
Name: 57238175
Synonym: CJE1439
Alternate gene names: NA
Gene position: 1344926-1345579 (Clockwise)
Preceding gene: 57238174
Following gene: 57238176
Centisome position: 75.65
GC content: 26.76
Gene sequence:
>654_bases ATGTCAGAAAATAAAGAAAATATTTCATTTGAGAACTATGAAAAGAATTTAAAGCTACAACTTGAAAGTAAAAGAAAAGA TTTAGATATTCAATTGACAAGTATAATCCCTGGACAATTTCAAACTATAAAATTATACATGTGGCTTTGCACTTTTATAA TAGCAGGTGACATCACTATACTTAATAACTATATAAAAACAACCCATACAGATCTATTTACTATTATTCTTTTTAGTGTT TCAATTATATTTCTAGGATATTGCGCTTTCTTTTCCTTGCTTGCCTTAAAAATAAATAATACAATAGCTTTTCCACAAGA TCAATACGGTGAGATGTCTAAATTAAATTCAGATAATTTAGAACATACAAATGGAATTAATGCCATGATATCTTCTATAT TAGATGCTTTCGATAAAAATAACAAAATTATTAATAATATGAGTAAAGATATTGGTAAAATTTATGTTTTTCTTGTTATT GGAGCTAGTATATCTTTTTTTGCTATAATAACAAGTGGTGCACAAATCGTAAAAGGAGAAATAATTATGTCGGACAATAA AGAAAAAGTAATAAAACCAACTCCACAAACTGGAACTACTACACCCATAATCCCAAAAACTAGAGGAGATAAACCCGAGC AAGAAAAAAAATAA
Upstream 100 bases:
>100_bases AATTTTAAATATATGTCAATATATATTTTTAATTTTTATATTAATTATAAATATATTAAGTTTTTAATATAATTATAAAA ATACTATGCAAGGAATTAAA
Downstream 100 bases:
>100_bases TTTTTAAGGCGTAATACGCCTTAATCAAACAAAATATAATACCCGAAAAAGAAAAATACAAATATGAGCCAATACTCCAT TTTCAAATCCTTAAAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITILNNYIKTTHTDLFTIILFSV SIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNLEHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVI GASISFFAIITSGAQIVKGEIIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK
Sequences:
>Translated_217_residues MSENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITILNNYIKTTHTDLFTIILFSV SIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNLEHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVI GASISFFAIITSGAQIVKGEIIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK >Mature_216_residues SENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITILNNYIKTTHTDLFTIILFSVS IIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNLEHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVIG ASISFFAIITSGAQIVKGEIIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24474; Mature: 24343
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITI CCCCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHH LNNYIKTTHTDLFTIILFSVSIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHCCHHHHCCCCCC EHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVIGASISFFAIITSGAQIVKGE CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHCCHHEEHHHHCCCEEEEEE IIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SENKENISFENYEKNLKLQLESKRKDLDIQLTSIIPGQFQTIKLYMWLCTFIIAGDITI CCCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHH LNNYIKTTHTDLFTIILFSVSIIFLGYCAFFSLLALKINNTIAFPQDQYGEMSKLNSDNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHCCHHHHCCCCCC EHTNGINAMISSILDAFDKNNKIINNMSKDIGKIYVFLVIGASISFFAIITSGAQIVKGE CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHCCHHEEHHHHCCCEEEEEE IIMSDNKEKVIKPTPQTGTTTPIIPKTRGDKPEQEKK EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA