Click here to switch to the map view.

The map label for this gene is epsH [H]

Identifier: 57238019

GI number: 57238019

Start: 1198131

End: 1199102

Strand: Reverse

Name: epsH [H]

Synonym: CJE1280

Alternate gene names: 57238019

Gene position: 1199102-1198131 (Counterclockwise)

Preceding gene: 57238020

Following gene: 57238018

Centisome position: 67.45

GC content: 21.91

Gene sequence:

>972_bases
ATGCCTAAAATTTCAATCATCTTGCCAACTTTTAATGTAGAAAAATATATAGCCAAAGCTTTAGAAAGTTGTATCAATCA
AAGTTTTAAAGATATAGAAATAATTGTAGTGGATGATTGTGGGAGTGATAAAAGTATAGATATAGCTAAAGAATATGCCA
AAAAAGATGAAAGAATAAAAATAATTCACAATGAAGAAAATTTAGGTCTTTTAAGAGCTAGATATGAAGGAGTTAAGGCA
GCTGGGGGGGGGTATATTATGTTTTTAGACCCTGATGATTATTTAGAACTTAATGCTTGTGAAGAGTGTGTGAGAATTTT
AAACACTGAAAAAGAAAGTGATTTTATATGGTTTGATTTTATATATAAAAGAATTTCAGGGGTTATAAATAGGGGAAATT
TTTTACAAGATCAAACTTTTACTATTTTTGAATATTGTGAGAATATCATAATTCAAAATAAAAATATCTGTTATTGGAAT
CTTTGTTCTAAACTTATTAAAACAGAAATATATTTAGCATCTTTTTCTTTTTTAGAAAAAGAGATATTAAATACTAGATT
AATTATGGCAGAAGATGCATTAATTTATTTTTTTATTATTTTAAATTGTGGAAAAATTACTACTAGTGCAAAAAATATTT
ATTATTATTGTGAAAATGACAATAGTTCTGTTGGGACTAATGATATTGTCAAAATTGAAAAAAACTTACAAGATGAAAAA
ATGGTTATTGGAATTTTACTAGAATTTTTAAATCATCATAAAAAGAATATTGAATTGTATTTGTATGTTTTTTTAAAAAT
AATGATTGGTAAATTAATCGTATATAAATTACATCGAGAAATAAAACTATATCGATTAAAATATAATTATATGATATATA
CAATGAAAAAAATAAAAAATAAATTTATAATAAAATATTTTTTATTGAAAAGATTTTTGATGGAAAAGTATTTTAAAAAT
AAATTTAATTGA

Upstream 100 bases:

>100_bases
TTTTGCGATAAACATTATGATAAATTCCTTCCTTTTATTAATATAAAAAATAAAATAAGATTTTATTTTCGCCACCCAAA
AAAGATTTTTAAGAAAAACA

Downstream 100 bases:

>100_bases
ATGTGTTATAATTATCGCTTAGATTACCATGTTGGAGTATTGGTATTGTTAAGCTTAAAATTTAATAAAGAATTAATGTG
TGTAAAATTTCCGTCATAAT

Product: lipooligosaccharide biosynthesis galactosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDKSIDIAKEYAKKDERIKIIHNEENLGLLRARYEGVKA
AGGGYIMFLDPDDYLELNACEECVRILNTEKESDFIWFDFIYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWN
LCSKLIKTEIYLASFSFLEKEILNTRLIMAEDALIYFFIILNCGKITTSAKNIYYYCENDNSSVGTNDIVKIEKNLQDEK
MVIGILLEFLNHHKKNIELYLYVFLKIMIGKLIVYKLHREIKLYRLKYNYMIYTMKKIKNKFIIKYFLLKRFLMEKYFKN
KFN

Sequences:

>Translated_323_residues
MPKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDKSIDIAKEYAKKDERIKIIHNEENLGLLRARYEGVKA
AGGGYIMFLDPDDYLELNACEECVRILNTEKESDFIWFDFIYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWN
LCSKLIKTEIYLASFSFLEKEILNTRLIMAEDALIYFFIILNCGKITTSAKNIYYYCENDNSSVGTNDIVKIEKNLQDEK
MVIGILLEFLNHHKKNIELYLYVFLKIMIGKLIVYKLHREIKLYRLKYNYMIYTMKKIKNKFIIKYFLLKRFLMEKYFKN
KFN
>Mature_322_residues
PKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDKSIDIAKEYAKKDERIKIIHNEENLGLLRARYEGVKAA
GGGYIMFLDPDDYLELNACEECVRILNTEKESDFIWFDFIYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWNL
CSKLIKTEIYLASFSFLEKEILNTRLIMAEDALIYFFIILNCGKITTSAKNIYYYCENDNSSVGTNDIVKIEKNLQDEKM
VIGILLEFLNHHKKNIELYLYVFLKIMIGKLIVYKLHREIKLYRLKYNYMIYTMKKIKNKFIIKYFLLKRFLMEKYFKNK
FN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=91, Percent_Identity=36.2637362637363, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788372, Length=99, Percent_Identity=36.3636363636364, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787259, Length=99, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38336; Mature: 38204

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDKSIDIAKEYAKKDERIK
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEE
IIHNEENLGLLRARYEGVKAAGGGYIMFLDPDDYLELNACEECVRILNTEKESDFIWFDF
EEECCCCCCHHHHHHCCCEECCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEHHHH
IYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWNLCSKLIKTEIYLASFSFLEK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHH
EILNTRLIMAEDALIYFFIILNCGKITTSAKNIYYYCENDNSSVGTNDIVKIEKNLQDEK
HHHHHEEEEECHHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCCCHHH
MVIGILLEFLNHHKKNIELYLYVFLKIMIGKLIVYKLHREIKLYRLKYNYMIYTMKKIKN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHHH
KFIIKYFLLKRFLMEKYFKNKFN
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDKSIDIAKEYAKKDERIK
CCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEE
IIHNEENLGLLRARYEGVKAAGGGYIMFLDPDDYLELNACEECVRILNTEKESDFIWFDF
EEECCCCCCHHHHHHCCCEECCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEHHHH
IYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWNLCSKLIKTEIYLASFSFLEK
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHH
EILNTRLIMAEDALIYFFIILNCGKITTSAKNIYYYCENDNSSVGTNDIVKIEKNLQDEK
HHHHHEEEEECHHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCCCHHH
MVIGILLEFLNHHKKNIELYLYVFLKIMIGKLIVYKLHREIKLYRLKYNYMIYTMKKIKN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHHH
KFIIKYFLLKRFLMEKYFKNKFN
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]