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The map label for this gene is 57237907

Identifier: 57237907

GI number: 57237907

Start: 1081296

End: 1081730

Strand: Reverse

Name: 57237907

Synonym: CJE1164

Alternate gene names: NA

Gene position: 1081730-1081296 (Counterclockwise)

Preceding gene: 57237908

Following gene: 57237906

Centisome position: 60.85

GC content: 30.34

Gene sequence:

>435_bases
ATGATTGCACGCTGGTTGTTTATTAGTTCAATATTTGTTGTTGCGCTTTTTGGTATTAACTTGAAATCATTTTTTACTTA
TACCTTTGATGCAAATAAGCAATATGATATGGAAAAAGCGAAGGCTTTGTATTTTCAAAATAAATGCAATACTTGCCATG
GAGATAATGCTGAAAAGAGTGTTATAGGATCTAGAATTTTAAAAGATATGTCTCCTGAGGATATTAAAGGAGCTTTGATA
GGTTATACTCTTGATAGTAGCAGTTCTACAACAGCTTCTCAAATGGCTTTTTATGCTAGAAATTTAAGCCACGAGGATAT
AGATAATATTATTGCTTATATTAAAGGTGGAAATTTTGCGCTTGATTTGCAAGTAAAAGATCTTCTTGAAGAAGAACCTG
CGCAAAAAACAAAACATAATATATTTCTAAAATAA

Upstream 100 bases:

>100_bases
GTTATCGCTATGATATTAAAAAAGAAAAAAAATACAACAAAAAAACACATAGATATCAAAATAAAACACAAACAGAAATT
ACAATAAAATAAGGAAAATC

Downstream 100 bases:

>100_bases
AATGTAAAAACTATAATTAAAAGGAATACTATGAAAAAACTAACTTTAACTTTAAGTGTTTTAACTATGGTAAATTGCTT
ATATGCTAAGGATATTAATA

Product: cytochrome C family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALYFQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALI
GYTLDSSSSTTASQMAFYARNLSHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK

Sequences:

>Translated_144_residues
MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALYFQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALI
GYTLDSSSSTTASQMAFYARNLSHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK
>Mature_144_residues
MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALYFQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALI
GYTLDSSSSTTASQMAFYARNLSHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16264; Mature: 16264

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALYFQNKCNTCHGDNAEKS
CCHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
VIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNLSHEDIDNIIAYIKGGNFA
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCEE
LDLQVKDLLEEEPAQKTKHNIFLK
EEEEHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure
MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALYFQNKCNTCHGDNAEKS
CCHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
VIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNLSHEDIDNIIAYIKGGNFA
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCEE
LDLQVKDLLEEEPAQKTKHNIFLK
EEEEHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA