| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237868
Identifier: 57237868
GI number: 57237868
Start: 1043022
End: 1043564
Strand: Reverse
Name: 57237868
Synonym: CJE1124
Alternate gene names: NA
Gene position: 1043564-1043022 (Counterclockwise)
Preceding gene: 57237869
Following gene: 57237867
Centisome position: 58.7
GC content: 28.36
Gene sequence:
>543_bases ATGGAAGCCGCAGAATTAGCCAAAAGATTAAAAGACTATGTGTGGGAAACTCTTAGAAGAAGTGAAGACTATTTATATAA AGTTTATATTTATGATTGTGAACCGTTAGATAAAAATGTTCCTATGCCTCCTATAGAAAAAACTGATAAATCTAAAAATT TAAGCAAAACTACAACTTATAAATTTAGAAGTGAATTATTAAAACATCTAAGAAAGCAACCGTATTTTGCTGTAAGATTA GGTGAAATTGATGTTAGCGAACTAAGCAATGAAGATTTTGTTATAGATATTAAACAAAAAGGTGTAGATATGAAAATAGG ACTTGATATTGCAACTTTAGCAAATAAACACCAAGTGGAAAAAATCATTTTAATTACTTCGGATAGCGATTTTGTTCCTG CTGTAAAACACGCTAGAAAAGAAGGGCTTATTGTGCAATTAGATACTATGAGATTTCCAGAAACTCGAATCAAAAAAGGT TTATTAGAACATATTGATATTCTCTCATCCGTTTTTATTAATAAAAATAAAAATGGTAATTAA
Upstream 100 bases:
>100_bases AAGATACGGAATTTTCTATAATTCAACCAAAAAAGATTGCTGTTCTTGTAGATCTTTCTTTTTTATTGAAGGATACAATA CACGCAAAAGCATTAAAACA
Downstream 100 bases:
>100_bases TTATTGTTTTTTATTTTGTTAAATAGATAACTAAAAAATGAATATTGTTAAAAGAAAAAATGAATGAATTTTTCAAAAAA ACTAAATAAAGTTTTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MEAAELAKRLKDYVWETLRRSEDYLYKVYIYDCEPLDKNVPMPPIEKTDKSKNLSKTTTYKFRSELLKHLRKQPYFAVRL GEIDVSELSNEDFVIDIKQKGVDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQLDTMRFPETRIKKG LLEHIDILSSVFINKNKNGN
Sequences:
>Translated_180_residues MEAAELAKRLKDYVWETLRRSEDYLYKVYIYDCEPLDKNVPMPPIEKTDKSKNLSKTTTYKFRSELLKHLRKQPYFAVRL GEIDVSELSNEDFVIDIKQKGVDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQLDTMRFPETRIKKG LLEHIDILSSVFINKNKNGN >Mature_180_residues MEAAELAKRLKDYVWETLRRSEDYLYKVYIYDCEPLDKNVPMPPIEKTDKSKNLSKTTTYKFRSELLKHLRKQPYFAVRL GEIDVSELSNEDFVIDIKQKGVDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQLDTMRFPETRIKKG LLEHIDILSSVFINKNKNGN
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20884; Mature: 20884
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAAELAKRLKDYVWETLRRSEDYLYKVYIYDCEPLDKNVPMPPIEKTDKSKNLSKTTTY CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH KFRSELLKHLRKQPYFAVRLGEIDVSELSNEDFVIDIKQKGVDMKIGLDIATLANKHQVE HHHHHHHHHHHHCCEEEEEECCEEHHHCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEE KIILITSDSDFVPAVKHARKEGLIVQLDTMRFPETRIKKGLLEHIDILSSVFINKNKNGN EEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEAAELAKRLKDYVWETLRRSEDYLYKVYIYDCEPLDKNVPMPPIEKTDKSKNLSKTTTY CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH KFRSELLKHLRKQPYFAVRLGEIDVSELSNEDFVIDIKQKGVDMKIGLDIATLANKHQVE HHHHHHHHHHHHCCEEEEEECCEEHHHCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEE KIILITSDSDFVPAVKHARKEGLIVQLDTMRFPETRIKKGLLEHIDILSSVFINKNKNGN EEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA