| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237856
Identifier: 57237856
GI number: 57237856
Start: 1031031
End: 1032317
Strand: Reverse
Name: 57237856
Synonym: CJE1111
Alternate gene names: NA
Gene position: 1032317-1031031 (Counterclockwise)
Preceding gene: 57237857
Following gene: 57237855
Centisome position: 58.07
GC content: 31.31
Gene sequence:
>1287_bases ATGAGTGAAACTTACGAGATTTATACACCTAATGGTGGTATATTAGATGTAGAAAAAAAAACGAATAAAATTTTATTATA TGATGGGGGAGCTAAGGTAGGTAAATACACCCAAGAATATTCTAAAGCTTTGTTTGAAGCTGATCGTATATTAAGAAACT CCCCCTACAAAGACTATAAACCCCAATACCTAGATCCTGAATTTCACACAGGGGAGAAATCTACTTTACTTGAATTTAAA GATTGGCAAAGTATTTATTTAAAAGATCCTATCAAAGGAAGCATAGCTCCTTGGACTAAAGCAGAAAAAGCTTATTATAA ATCTTTAAAAACTAAAAGAGAAAGATATAAATATTTAGTTATAAGAAGTGGTATAAGAAGTGTTGTTATAGATATACCTT ATGAAGCTATAGGAGCTGTAGATGAAAAAGGAAATGTAGATCCTAAATATGAAAAATTATATAGAATAGTAGATGATAAT AAACATAATCTAAGATCAAGTTTATTTCATAATGAATGGGGTATGGCAGCAGGAATATTAGGTGATTATAAATACCTAGC TAATGATATGTCTCAAAATGGTTTTAATGCAAGATTTATACAAGCTACTATACTTTATATACAATTAAGTGGAGGAAGTA GTATATTAGATAAACCTCATTTATTAGGTGCTATTTATGGTTATGCAGATATTGCTGTAGGAAGTGGTTTAGTAGGAGTG CATAAAAATCCTTTAAGAGAACAAGAGATTAAAACCTTAGCTAAGACTTTAAAACCTGATGAATTTGGTATGCTTCCTTT TATAGATGAGATTATGGGAGTAGATTGGGTGATTGATTTAAATAAATATGATATAGCCAGTGATCAATTTGGAAGTATGT ATAAAGCCTTAAGAAGTGATATAGTTGAGGGTAAGATAAAAGATCCAAGAGATATAGATTCTACTTATGAAAGCAGAAGA GAATTTGATCGTTATAGGGGAGGGTATAAAAATGGTATGAGGCAAGGCTATGAAACCGATACACCTAATGATTGGAGTGA AGAAAGGGCTCAACTTTTTAATGATACTTTAATATTACATGCCAAACTAGCAGCCCTAACCCCACCTCAAGGCTATCCTA ATGCCCCTTATTATTTTACCCCTGAAAATCTAGAATGGTATTATAAAAGACATAAGCTTGATAGACTCCTTGATCCAAGA ATTCCTGCTATTTATAGATATAATTTTCCGCAAGAACTTCGAGCTAAAATACTAGCTTATGCTAAAGAGCATAATATAAA AGAGTAA
Upstream 100 bases:
>100_bases GATACTAATAAATCCCAAGATTATTCTAATAAGTTTATAGGCAGACTAGCTACAACTATAATCATGGAAGATGGTTTATA TATAGGATGAAAGGATAAAA
Downstream 100 bases:
>100_bases GAATGAATTTCATTAGCTACTACTATCATTATGAAAAATGGTTTATATATGGGTTAAATTAAGAAAGGATAGATAATGAG TGAAACTTATGAGATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSETYEIYTPNGGILDVEKKTNKILLYDGGAKVGKYTQEYSKALFEADRILRNSPYKDYKPQYLDPEFHTGEKSTLLEFK DWQSIYLKDPIKGSIAPWTKAEKAYYKSLKTKRERYKYLVIRSGIRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRIVDDN KHNLRSSLFHNEWGMAAGILGDYKYLANDMSQNGFNARFIQATILYIQLSGGSSILDKPHLLGAIYGYADIAVGSGLVGV HKNPLREQEIKTLAKTLKPDEFGMLPFIDEIMGVDWVIDLNKYDIASDQFGSMYKALRSDIVEGKIKDPRDIDSTYESRR EFDRYRGGYKNGMRQGYETDTPNDWSEERAQLFNDTLILHAKLAALTPPQGYPNAPYYFTPENLEWYYKRHKLDRLLDPR IPAIYRYNFPQELRAKILAYAKEHNIKE
Sequences:
>Translated_428_residues MSETYEIYTPNGGILDVEKKTNKILLYDGGAKVGKYTQEYSKALFEADRILRNSPYKDYKPQYLDPEFHTGEKSTLLEFK DWQSIYLKDPIKGSIAPWTKAEKAYYKSLKTKRERYKYLVIRSGIRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRIVDDN KHNLRSSLFHNEWGMAAGILGDYKYLANDMSQNGFNARFIQATILYIQLSGGSSILDKPHLLGAIYGYADIAVGSGLVGV HKNPLREQEIKTLAKTLKPDEFGMLPFIDEIMGVDWVIDLNKYDIASDQFGSMYKALRSDIVEGKIKDPRDIDSTYESRR EFDRYRGGYKNGMRQGYETDTPNDWSEERAQLFNDTLILHAKLAALTPPQGYPNAPYYFTPENLEWYYKRHKLDRLLDPR IPAIYRYNFPQELRAKILAYAKEHNIKE >Mature_427_residues SETYEIYTPNGGILDVEKKTNKILLYDGGAKVGKYTQEYSKALFEADRILRNSPYKDYKPQYLDPEFHTGEKSTLLEFKD WQSIYLKDPIKGSIAPWTKAEKAYYKSLKTKRERYKYLVIRSGIRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRIVDDNK HNLRSSLFHNEWGMAAGILGDYKYLANDMSQNGFNARFIQATILYIQLSGGSSILDKPHLLGAIYGYADIAVGSGLVGVH KNPLREQEIKTLAKTLKPDEFGMLPFIDEIMGVDWVIDLNKYDIASDQFGSMYKALRSDIVEGKIKDPRDIDSTYESRRE FDRYRGGYKNGMRQGYETDTPNDWSEERAQLFNDTLILHAKLAALTPPQGYPNAPYYFTPENLEWYYKRHKLDRLLDPRI PAIYRYNFPQELRAKILAYAKEHNIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49508; Mature: 49376
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETYEIYTPNGGILDVEKKTNKILLYDGGAKVGKYTQEYSKALFEADRILRNSPYKDYK CCCCEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PQYLDPEFHTGEKSTLLEFKDWQSIYLKDPIKGSIAPWTKAEKAYYKSLKTKRERYKYLV CCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGIRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRIVDDNKHNLRSSLFHNEWGMAAGIL HHHCCHHEEEECCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH GDYKYLANDMSQNGFNARFIQATILYIQLSGGSSILDKPHLLGAIYGYADIAVGSGLVGV HHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECC HKNPLREQEIKTLAKTLKPDEFGMLPFIDEIMGVDWVIDLNKYDIASDQFGSMYKALRSD CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH IVEGKIKDPRDIDSTYESRREFDRYRGGYKNGMRQGYETDTPNDWSEERAQLFNDTLILH HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCHHEEE AKLAALTPPQGYPNAPYYFTPENLEWYYKRHKLDRLLDPRIPAIYRYNFPQELRAKILAY EHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH AKEHNIKE HHHCCCCC >Mature Secondary Structure SETYEIYTPNGGILDVEKKTNKILLYDGGAKVGKYTQEYSKALFEADRILRNSPYKDYK CCCEEEECCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC PQYLDPEFHTGEKSTLLEFKDWQSIYLKDPIKGSIAPWTKAEKAYYKSLKTKRERYKYLV CCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGIRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRIVDDNKHNLRSSLFHNEWGMAAGIL HHHCCHHEEEECCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH GDYKYLANDMSQNGFNARFIQATILYIQLSGGSSILDKPHLLGAIYGYADIAVGSGLVGV HHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEECC HKNPLREQEIKTLAKTLKPDEFGMLPFIDEIMGVDWVIDLNKYDIASDQFGSMYKALRSD CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH IVEGKIKDPRDIDSTYESRREFDRYRGGYKNGMRQGYETDTPNDWSEERAQLFNDTLILH HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCHHEEE AKLAALTPPQGYPNAPYYFTPENLEWYYKRHKLDRLLDPRIPAIYRYNFPQELRAKILAY EHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH AKEHNIKE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA