| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237778
Identifier: 57237778
GI number: 57237778
Start: 968542
End: 968976
Strand: Reverse
Name: 57237778
Synonym: CJE1028
Alternate gene names: NA
Gene position: 968976-968542 (Counterclockwise)
Preceding gene: 57237779
Following gene: 57237777
Centisome position: 54.5
GC content: 29.2
Gene sequence:
>435_bases ATGAAAAAAACGCTTCAAATTGCTTTAGCTGCAACTTTTTTTGCAGGTTGTGCTAGTACTTCTGTTACTTCATCTGTTTC TAAAGGTAGTAATGAACTTATGCAGAATCAGCTTTTCAAAATAGAAAAAATTATAGTTAATGGTAAAACTTTTGATCCAA AAAACGCGGAGGAAAGTCCAAATATTAGTTTTGAAAATAATAAATTTTATGGTTATTCAGGGTGTAATCGTTTTTTTGGT TCTTATCAAACTAAGGCGGATACTTTGCAAATCGAAGGTGATCGCGTAGCTTCAACTCAAATGCTTTGTCATCCAATGGA TGTAATGGATTTTGAAAATTCTTTCCTTTCAAATTTCAAAGGAATTTTTAAAATTTCAAATGAAAATGGAAAACTTGTTT TAAGTAATGATGAAATGAAGATCTTTTTTAAATAA
Upstream 100 bases:
>100_bases AGAAATTTCTAAAATTCTACTTCAAGTTGTAGATGAGTTAAAAATAGTGTGTCATAATCTCGAAAGCGAACTTAACCAAT TTTAAATTTAAAGGAATAAA
Downstream 100 bases:
>100_bases TATCCTAAAGCCTCGAAATATCGAGGTAATCTTCTTAAATTTGACAAAAGTCTAAAAAATGATACAATTATAATTTTATT ATCAAAAAAGGTAGTTAAAT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKTLQIALAATFFAGCASTSVTSSVSKGSNELMQNQLFKIEKIIVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFG SYQTKADTLQIEGDRVASTQMLCHPMDVMDFENSFLSNFKGIFKISNENGKLVLSNDEMKIFFK
Sequences:
>Translated_144_residues MKKTLQIALAATFFAGCASTSVTSSVSKGSNELMQNQLFKIEKIIVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFG SYQTKADTLQIEGDRVASTQMLCHPMDVMDFENSFLSNFKGIFKISNENGKLVLSNDEMKIFFK >Mature_144_residues MKKTLQIALAATFFAGCASTSVTSSVSKGSNELMQNQLFKIEKIIVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFG SYQTKADTLQIEGDRVASTQMLCHPMDVMDFENSFLSNFKGIFKISNENGKLVLSNDEMKIFFK
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16134; Mature: 16134
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLQIALAATFFAGCASTSVTSSVSKGSNELMQNQLFKIEKIIVNGKTFDPKNAEESP CCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCC NISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQMLCHPMDVMDFENSFLSNFK CCEECCCEEEEECCHHHHHCCCCCCCCEEEECCCEECCHHHHCCCCCHHHHHHHHHHCCC GIFKISNENGKLVLSNDEMKIFFK EEEEEECCCCEEEEECCCEEEEEC >Mature Secondary Structure MKKTLQIALAATFFAGCASTSVTSSVSKGSNELMQNQLFKIEKIIVNGKTFDPKNAEESP CCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCC NISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQMLCHPMDVMDFENSFLSNFK CCEECCCEEEEECCHHHHHCCCCCCCCEEEECCCEECCHHHHCCCCCHHHHHHHHHHCCC GIFKISNENGKLVLSNDEMKIFFK EEEEEECCCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA