Click here to switch to the map view.

The map label for this gene is nlpA [H]

Identifier: 57237616

GI number: 57237616

Start: 799465

End: 800235

Strand: Reverse

Name: nlpA [H]

Synonym: CJE0862

Alternate gene names: 57237616

Gene position: 800235-799465 (Counterclockwise)

Preceding gene: 57237617

Following gene: 57237615

Centisome position: 45.01

GC content: 29.57

Gene sequence:

>771_bases
ATGAATTTATTTAAAATTATTATACTCGCTTGCATTCTAAATTTATCTAGCCTATTTGCACAAAACATTACTATAGGAGC
CACTCCAAATCCTTTTGGTAGCTTACTAGAACTAATGAAAGATGATTTTAAAAACAAAGGGTATGAGCTTAAAATAGTAG
AATTTTCAGACTATATTTTGCCCAATCGTGCATTAGAGGAAAAAGAACTTGATGCAAATTTATATCAACACAAACCTTTT
TTAGAAGAATACAACCTAAAAAAAGGTTCAAATTTAATTGCAACAACGCCTGTACTTATAGCTCCAGTAGGAGTTTATAG
TAAAAAAATCAAAAATTTAGAAAATCTTAAAGAAGGTGCTAGAGTTGCTATACCTAATGATGCGACCAATGAAAGCAGAG
CTTTAGAGCTTTTAGAGAAAGCAAAATTAATAGAGCTTAACAAAAATACTCTAAAAACCCCATTGGACATAAACAAAAAT
CCAAAAAAACTTAAATTTATAGAACTTAAAGCCGCACAACTTCCAAGAGCTTTAGATGATGTTGATATTGCTATAATTAA
TTCTAATTTCGCACTTGGAGCTGGTCTTAATCCAAGTAAAGATACTATTTTTAGGGAAGATAAAAATAGCCCTTATGTAA
ATTATGTTGTGGTACGCTCAGAAGGTAAAAATAGCGAAAAAACCAAAGTAATTGATGAAATTTTAAGAAGCGATAAATTT
AAAGCCATCATTAATGAACATTATAAAGATATATTAATCCCAGCTTTTTAG

Upstream 100 bases:

>100_bases
CAAACAATTTATCATAGAAAAATACAACGGATCTGTTTTACCTGCTTTTTAATTTTGTCCCTTACCTAGGGACTTTTTTC
TTAAGTACAAAGGAGTTTTT

Downstream 100 bases:

>100_bases
GAGTATAATATGAATATTAAAAAAATATTTTTAAGTGTTTTATTTACAATTAGCCTTAGTTTTGGGGCAGATAAAACCAT
AATCATAGGTGCAACACCAA

Product: NLPA family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKF
KAIINEHYKDILIPAF

Sequences:

>Translated_256_residues
MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKF
KAIINEHYKDILIPAF
>Mature_256_residues
MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYILPNRALEEKELDANLYQHKPF
LEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKF
KAIINEHYKDILIPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=227, Percent_Identity=47.5770925110132, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI1786396, Length=223, Percent_Identity=43.4977578475336, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28844; Mature: 28844

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYIL
CHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGA
CCCCCCHHHHCCHHHHCCCCHHHCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHCCC
RVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKNPKKLKFIELKAAQLPRALDD
EEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCC
VDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKF
CEEEEEECCEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHH
KAIINEHYKDILIPAF
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKNKGYELKIVEFSDYIL
CHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAPVGVYSKKIKNLENLKEGA
CCCCCCHHHHCCHHHHCCCCHHHCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHCCC
RVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKNPKKLKFIELKAAQLPRALDD
EEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCCC
VDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKF
CEEEEEECCEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHH
KAIINEHYKDILIPAF
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]