Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57237590

Identifier: 57237590

GI number: 57237590

Start: 529013

End: 529417

Strand: Direct

Name: 57237590

Synonym: CJE0588

Alternate gene names: NA

Gene position: 529013-529417 (Clockwise)

Preceding gene: 57237589

Following gene: 57237591

Centisome position: 29.76

GC content: 29.14

Gene sequence:

>405_bases
ATGCTTTGTGCTACGGCTAAAAAACTCATTATCGCTAAAGTTAAAAATTCTTACAAAATGATAGAAGATGATGAAGTTTT
GAAAGCCTATTTTATGGAAGCATTTTATTATATTTTATCAAAATGTGTTCCTAGCGTTCTTTTAAAAAATGTAGAGCAAG
GCGAAAAAGTTTTTAGGCAAGTTAGAAATAATCATTTTTTGATTATTCCTGATGAGCCTGATTTTGACAATGAAAAAGAA
CATTTAATGATAGATGAAACACTTAGTTTTGCTGTGATTAATTATGTTTGTTATTTGATTACAAGATGCGAAGAAAAAGA
CTTTCTGGCATTATGTGACAAGATAATTTATGAGTATATAGCTAATGATGGCAAGGAGCTTGATGATGAAAGAACATGGT
TGTAA

Upstream 100 bases:

>100_bases
TAGAAGTAAGAAATGCTGATGCTTTTGCTATAGGCGTGGGATTAACTAGTGGAAATAATGCAAAGGCTAAAGCGGTTTTA
AAAGCAGCAAAAGGTGCATA

Downstream 100 bases:

>100_bases
TTGTAATTTCACAAAAAAAATTAATAGAGCTTTGAGTTATAAAGACTATGTGCAAAGTATAAATAGTGCTGATTTTATAG
CTTATTTAGATGATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKE
HLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL

Sequences:

>Translated_134_residues
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKE
HLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL
>Mature_134_residues
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKE
HLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15836; Mature: 15836

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQ
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYI
HHCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ANDGKELDDERTWL
HCCCCCCCCCCCCC
>Mature Secondary Structure
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQ
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYI
HHCCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ANDGKELDDERTWL
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA