| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237585
Identifier: 57237585
GI number: 57237585
Start: 521507
End: 522718
Strand: Direct
Name: 57237585
Synonym: CJE0583
Alternate gene names: NA
Gene position: 521507-522718 (Clockwise)
Preceding gene: 57237584
Following gene: 57237586
Centisome position: 29.33
GC content: 30.2
Gene sequence:
>1212_bases ATGGCATTTTATAACCCACAAAGAGTAGTATTTAATCCTGATACAGGCGTTATACAAAACGCAGGAAAAGTCGGTGGTGT CTTATATGACATCATGAGCAAAAGTTTTGATGATAAAGTTAAAGCTAATGAGTTTCAGCAAGAGCAAGATTTAAGAAAGC AACAAATGGAATTTAATGAGGCTATGCAAAACAATCAAATCTTGCAAAATGAGAGAAACTTTGATTATCAAAAAGAAAGA GCAAATATAGCAGATCAGCAATGGCAAATGAATTATAACCAAAGAGCTAGACAATATGCCATGCAAAATGCTTTAAGACA GCAAGCGATAAATGCTAATAAGGCTTACAAGGATTTAAATTATCAAAAAGGATTATTAGAACTTCAAAAATTACAAAATG AGATAAATACAAAACAAAAAGAGCAAGATTTATTAAATGGAGTTCTTAGTAATACTCAAGGTTTCAATAGTCAAAACAAT GCAAATTTACAAAACAATACAAGATATAAAGCAGACGCTCAGTTTTTAGATTTAGCAAGTAATCAAGGTAAAACATATGA TACAACCCATGGTTTTTGGAATGGAGCTATAGAGCGTGGTTTTGGTGGATGGGGAAGTCAAAGCACGGATTTAAATGATG CAAGTGATTTATTTTTAAAAAGAATGCAAAGTGATTTATTAAGGGGTGGTAAAAATGCTAAATGGAATTTAGAGAATATA CAAGCCAATTTCCCTATTAATGGTTATACTATGGAAGCAAATAATCAAAGGGTAGCTCAAGCATTAGCAGGAGAATGGTT AGCAGAAGCTCCAAACTCTTTTAAAATGGAATTAGCAGAAAGACTAGGAAACGCAAAAACAAATATTGAGAAACAAAGTG CTATAGAAGATTATAAAAATAATATGGATTTTTATAATAATTATGCTCCAAAGGTAAAAGCTTTTTATTGGGATGAAAAA TACTCAAAACCTAGTAAAAATGCAGTAATTATAGGTAATTCAACAACTAATCAAAATATACAAAATGATTTAGCCAAAAA TACATTAGAAGTGCAAAATCAAAATACACCAAAATTACATAGCGTTAGTTTTAATGGAATTAATGCTCAAATATCAGAGC CTGATGCTAATGGTAATGTAATATTAGTTAATCAAGCAGGTAGAAAAATGCAAGTTAGCGTAGAAGAATTAAAAAAACAA GGATTAATATAA
Upstream 100 bases:
>100_bases TTTAGTGCTAAGGGTGGCGACCCTTGGCACCACACCTTTTAAAATTATACACAAACTTCCTTAAATCCTTTATTTTAAAA GAAAGAATAAAGGAAACAAA
Downstream 100 bases:
>100_bases TGAATATAAGAGAATTTTTATTAGAAAAACCACAAGAAAATAACATTATTTCATTTTTGCAAGATGGAGCAAGTCAAAGT GAAAATCAAAATACAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEFQQEQDLRKQQMEFNEAMQNNQILQNERNFDYQKER ANIADQQWQMNYNQRARQYAMQNALRQQAINANKAYKDLNYQKGLLELQKLQNEINTKQKEQDLLNGVLSNTQGFNSQNN ANLQNNTRYKADAQFLDLASNQGKTYDTTHGFWNGAIERGFGGWGSQSTDLNDASDLFLKRMQSDLLRGGKNAKWNLENI QANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKMELAERLGNAKTNIEKQSAIEDYKNNMDFYNNYAPKVKAFYWDEK YSKPSKNAVIIGNSTTNQNIQNDLAKNTLEVQNQNTPKLHSVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQ GLI
Sequences:
>Translated_403_residues MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEFQQEQDLRKQQMEFNEAMQNNQILQNERNFDYQKER ANIADQQWQMNYNQRARQYAMQNALRQQAINANKAYKDLNYQKGLLELQKLQNEINTKQKEQDLLNGVLSNTQGFNSQNN ANLQNNTRYKADAQFLDLASNQGKTYDTTHGFWNGAIERGFGGWGSQSTDLNDASDLFLKRMQSDLLRGGKNAKWNLENI QANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKMELAERLGNAKTNIEKQSAIEDYKNNMDFYNNYAPKVKAFYWDEK YSKPSKNAVIIGNSTTNQNIQNDLAKNTLEVQNQNTPKLHSVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQ GLI >Mature_402_residues AFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEFQQEQDLRKQQMEFNEAMQNNQILQNERNFDYQKERA NIADQQWQMNYNQRARQYAMQNALRQQAINANKAYKDLNYQKGLLELQKLQNEINTKQKEQDLLNGVLSNTQGFNSQNNA NLQNNTRYKADAQFLDLASNQGKTYDTTHGFWNGAIERGFGGWGSQSTDLNDASDLFLKRMQSDLLRGGKNAKWNLENIQ ANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKMELAERLGNAKTNIEKQSAIEDYKNNMDFYNNYAPKVKAFYWDEKY SKPSKNAVIIGNSTTNQNIQNDLAKNTLEVQNQNTPKLHSVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQG LI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45920; Mature: 45789
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEFQQEQDLRKQQMEFNE CCCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AMQNNQILQNERNFDYQKERANIADQQWQMNYNQRARQYAMQNALRQQAINANKAYKDLN HHHCCCHHHCCCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YQKGLLELQKLQNEINTKQKEQDLLNGVLSNTQGFNSQNNANLQNNTRYKADAQFLDLAS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHC NQGKTYDTTHGFWNGAIERGFGGWGSQSTDLNDASDLFLKRMQSDLLRGGKNAKWNLENI CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHE QANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKMELAERLGNAKTNIEKQSAIEDYKN EEECCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHC NMDFYNNYAPKVKAFYWDEKYSKPSKNAVIIGNSTTNQNIQNDLAKNTLEVQNQNTPKLH CCCHHHCCCCCEEEEEECHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE SVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQGLI EEEECCCCCEECCCCCCCCEEEEECCCCEEEEEHHHHHHCCCC >Mature Secondary Structure AFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEFQQEQDLRKQQMEFNE CCCCCCEEEECCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AMQNNQILQNERNFDYQKERANIADQQWQMNYNQRARQYAMQNALRQQAINANKAYKDLN HHHCCCHHHCCCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YQKGLLELQKLQNEINTKQKEQDLLNGVLSNTQGFNSQNNANLQNNTRYKADAQFLDLAS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHC NQGKTYDTTHGFWNGAIERGFGGWGSQSTDLNDASDLFLKRMQSDLLRGGKNAKWNLENI CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHE QANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKMELAERLGNAKTNIEKQSAIEDYKN EEECCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHC NMDFYNNYAPKVKAFYWDEKYSKPSKNAVIIGNSTTNQNIQNDLAKNTLEVQNQNTPKLH CCCHHHCCCCCEEEEEECHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE SVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQGLI EEEECCCCCEECCCCCCCCEEEEECCCCEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA