| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237581
Identifier: 57237581
GI number: 57237581
Start: 518483
End: 520021
Strand: Direct
Name: 57237581
Synonym: CJE0579
Alternate gene names: NA
Gene position: 518483-520021 (Clockwise)
Preceding gene: 57237580
Following gene: 57237582
Centisome position: 29.16
GC content: 30.93
Gene sequence:
>1539_bases ATGAAAACAAAAAGAACTAATGATGAGAGAGTGTCGTTTTTAACACAACTCATTAGCGAAAGTAAAAGTGGATATGAAAA TTACAAACCACACTTTAAAGAGTTGCAAGATGCTTATTTGCTTGAAAATAAGGTAATGCAAAAATTGAGAAAAAGAAATA AATCAAGTATTTACATACCAAAAATAAACGCTAAGGTAAAGTATTTAATCACTAGCTTAAATGATGTATATTTTAATAGT GAGAGAATGGCAGATATTGAAACTTACATTAATAGCGATGATACGATTATAGAGCTATGGCAGAATGCAATTGATTTTTA TAGTGGTAAAATCAATATGTTTAAGATTTTTCAACCGCTTTTCTTAGATGTTTTACTTGTGGGAACAAGTATAGCTAAGG TTACTTGGCATAAGGGAATGCCACGCATTGAAAGAGTAGATATTGATAGTATATTCTTTGATCCAAATGCATTAAATAGC GAGGATGTAGGATATATAGTCAATGAAATTTACCTAACCTATAATCAAATCCATGAAAGACAAAAGCTAGGATTTTATAA AAAAAATGAAATTAAAAAGCTTTTTGATGAAGATGATGAGTATAAAAAAGTAAAGCTTTATGATATTTATGAAAGAAAAA ACGATGATGAGTGGGTGGTTTCTACCTTATTTGAAAATAATTTACTTAGAAATGAAGTTACTTTGCAAGATGGACAGCCT TTTATCTGGGGTTCAATGCTACCACAACTTAAAAAGATAGATAACGAAAACTATGTAAGTGCTTATGGCGAGCCTATAAT GGCTTCTGCTATGCCTTTGCAAGATGAAATTAATATAACTAGAAATCTTTTAATAGATGCAGTAAGAACTCATATCATGC CTAAAATAATGATGCCAAAATCAATGGGAGTAAGCAGAGAAGATATAGAAACCTTAGGAAAACCAATATATACAGACGAT CCAAAGGGTGTGCAAATATTACCACCACCAAATGTAAATAGTGCGGGAATGAATTTACAGCTTTTAGAAAGCGAACTCAC AGAAGTTATAGGAGTTAGTCCACAAAACAATGGAGCTCAAACTGCACAAAATGAAACAGCAACAGAAATTAGCATAAAAG CACAAGAAGGTGGAAGAAGAAGTGCTGACTACATAAGACAGTATAACGAAACTTTTATAGAGCCTTTATTTGATAGATTT GCAATGCTTGTTTTTAAGTATGGAGAAGATAGTTTTTTTAATGGTTTTCAAAGAGAGGATATACCTAGTTTTAGATTTAA AATTCAAACCGGCACAGGTGCCATGAATAAAGAAATTAGACGTGCAGGAATTCAAGCTAGTATGCAAGTTTTTTCACAAT TATATCAAATGTATATGAGCATAGGCGATGCAAATTCTGCTTATGGGATTATAAATGCTAGTAAAGAACTTACTAAAGAA TTATTACCAATTTTAGGTGTAAAGAATGTAAATAGTTTATTTGCTTTTGAAAATAATGAAGATATTAATCCACAAATGCA AGGAGAAGCTAATGCTTAA
Upstream 100 bases:
>100_bases AAAAGAGAATTTGCGGAGTTTTTATTTGAAAAAGGAGTGAATGAAAAAGATATTTTAAAAATAACAAATTTAAGCAAAAC AACAATATGGAGAATTATGA
Downstream 100 bases:
>100_bases TATTGAAATTAAAAGTGATATATCTAAAACTAAAGGAGGAAAGAAATTAATAGATTTTATCAAAGCAAAATATAGTGAAT GTTTTTATATAGCAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIPKINAKVKYLITSLNDVYFNS ERMADIETYINSDDTIIELWQNAIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNS EDVGYIVNEIYLTYNQIHERQKLGFYKKNEIKKLFDEDDEYKKVKLYDIYERKNDDEWVVSTLFENNLLRNEVTLQDGQP FIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDD PKGVQILPPPNVNSAGMNLQLLESELTEVIGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRF AMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMSIGDANSAYGIINASKELTKE LLPILGVKNVNSLFAFENNEDINPQMQGEANA
Sequences:
>Translated_512_residues MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIPKINAKVKYLITSLNDVYFNS ERMADIETYINSDDTIIELWQNAIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNS EDVGYIVNEIYLTYNQIHERQKLGFYKKNEIKKLFDEDDEYKKVKLYDIYERKNDDEWVVSTLFENNLLRNEVTLQDGQP FIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDD PKGVQILPPPNVNSAGMNLQLLESELTEVIGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRF AMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMSIGDANSAYGIINASKELTKE LLPILGVKNVNSLFAFENNEDINPQMQGEANA >Mature_512_residues MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIPKINAKVKYLITSLNDVYFNS ERMADIETYINSDDTIIELWQNAIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNS EDVGYIVNEIYLTYNQIHERQKLGFYKKNEIKKLFDEDDEYKKVKLYDIYERKNDDEWVVSTLFENNLLRNEVTLQDGQP FIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDD PKGVQILPPPNVNSAGMNLQLLESELTEVIGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRF AMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMSIGDANSAYGIINASKELTKE LLPILGVKNVNSLFAFENNEDINPQMQGEANA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58985; Mature: 58985
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE KINAKVKYLITSLNDVYFNSERMADIETYINSDDTIIELWQNAIDFYSGKINMFKIFQPL ECCCEEEHHHHHHHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH FLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNSEDVGYIVNEIYLTYNQIHER HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QKLGFYKKNEIKKLFDEDDEYKKVKLYDIYERKNDDEWVVSTLFENNLLRNEVTLQDGQP HHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHCCEEEECCCCC FIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPK EEHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC SMGVSREDIETLGKPIYTDDPKGVQILPPPNVNSAGMNLQLLESELTEVIGVSPQNNGAQ CCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC TAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLVFKYGEDSFFNGFQRED CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC IPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMSIGDANSAYGIINASKELTKE CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH LLPILGVKNVNSLFAFENNEDINPQMQGEANA HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENKVMQKLRKRNKSSIYIP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE KINAKVKYLITSLNDVYFNSERMADIETYINSDDTIIELWQNAIDFYSGKINMFKIFQPL ECCCEEEHHHHHHHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH FLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNSEDVGYIVNEIYLTYNQIHER HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QKLGFYKKNEIKKLFDEDDEYKKVKLYDIYERKNDDEWVVSTLFENNLLRNEVTLQDGQP HHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHCCEEEECCCCC FIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITRNLLIDAVRTHIMPKIMMPK EEHHHHHHHHHHCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC SMGVSREDIETLGKPIYTDDPKGVQILPPPNVNSAGMNLQLLESELTEVIGVSPQNNGAQ CCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC TAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDRFAMLVFKYGEDSFFNGFQRED CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC IPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMYMSIGDANSAYGIINASKELTKE CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH LLPILGVKNVNSLFAFENNEDINPQMQGEANA HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA