| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237571
Identifier: 57237571
GI number: 57237571
Start: 512642
End: 513376
Strand: Reverse
Name: 57237571
Synonym: CJE0569
Alternate gene names: NA
Gene position: 513376-512642 (Counterclockwise)
Preceding gene: 57237587
Following gene: 57237570
Centisome position: 28.88
GC content: 25.31
Gene sequence:
>735_bases ATGGGAAGAAATGGAGATATATTCGATTTTCATTTTGATACTGAAAAATTTAAATTTTATTTAAAAAATAGAGATAAAAA AGTTACATATCAAGATTTGATGGAAATTTTATATAAAAATGGCATAGAAAGCTCAGAAGCAACAATAAAAAAATGGTTGA TGTCTAAAGAAGATAATAAAACAAAACCTAAACCACAATATATAAAAATTTTATGTAATGCATTGGATATTCCTTTCAAC GAAGTGATATTGCAAGATGTTTTTAGAAATGATAATCAAATTAACTTCAGATATTTCCCAGATATTTATGCAAGTGCAGG ACTTGGAACCTCATCTCAAAGTGAAGAAGTTAAAATAGTTTCCGTTGATGAAAATTTTCTAAAAGAAATTTTAGATATAC CTATAAAGAAGAGTTATGATATTATAAAAATTAATGGCGATAGCATGGAACCTATTTTATCTAATGGAGATTTTATTATT GTGGATAGAAGCAAAAATTCACTTCAAACTATTTCAAATGCAGATATTGTTATTTTTAGAAAAAATGATGATTTATTTTG CAAAAAAATTAAAAAAGAACCTTTTGAAGATTATATTTTTTTAGTTTCTGAAAATAAAAAATACGAGGATAAAAAAGTAG ATAATAGCGAATTTGAACAATGCGAGATCTTAGGTGCTGTAGTATCAAAAATGGCTGTTGAAACCTTTAAAAATTTTATA GAAGTGGTGGGATGA
Upstream 100 bases:
>100_bases AAAATAAAGAAACTTAATAAATATTTAATTATGTTTCTAATTATGGAACATTATTTGCTTGAAAAAAGTGTATAATTTTT ATACTAAAAAAGGAGAGAAT
Downstream 100 bases:
>100_bases GAGTAAAATTAAATATTTTTGAGATATCTAATATTATAAGGGTTACTGATTATGGAGCTAGTTGTCCTTTGGAAGTAAGC ATTAAAGATAATTCTAAATT
Product: phage repressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESSEATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFN EVILQDVFRNDNQINFRYFPDIYASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFII VDRSKNSLQTISNADIVIFRKNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILGAVVSKMAVETFKNFI EVVG
Sequences:
>Translated_244_residues MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESSEATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFN EVILQDVFRNDNQINFRYFPDIYASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFII VDRSKNSLQTISNADIVIFRKNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILGAVVSKMAVETFKNFI EVVG >Mature_243_residues GRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESSEATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFNE VILQDVFRNDNQINFRYFPDIYASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFIIV DRSKNSLQTISNADIVIFRKNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILGAVVSKMAVETFKNFIE VVG
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28391; Mature: 28260
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESSEATIKKWLMSKEDNK CCCCCCEEEEEECHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC TKPKPQYIKILCNALDIPFNEVILQDVFRNDNQINFRYFPDIYASAGLGTSSQSEEVKIV CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCCCCEEEE SVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFIIVDRSKNSLQTISNADIVIFR EECHHHHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCHHHCCCCCEEEEE KNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILGAVVSKMAVETFKNFI CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVVG HHCC >Mature Secondary Structure GRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESSEATIKKWLMSKEDNK CCCCCEEEEEECHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC TKPKPQYIKILCNALDIPFNEVILQDVFRNDNQINFRYFPDIYASAGLGTSSQSEEVKIV CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCCCCEEEE SVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFIIVDRSKNSLQTISNADIVIFR EECHHHHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCHHHCCCCCEEEEE KNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILGAVVSKMAVETFKNFI CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVVG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA