| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is fusA [H]
Identifier: 57237545
GI number: 57237545
Start: 496336
End: 498411
Strand: Direct
Name: fusA [H]
Synonym: CJE0542
Alternate gene names: 57237545
Gene position: 496336-498411 (Clockwise)
Preceding gene: 57237544
Following gene: 57237546
Centisome position: 27.92
GC content: 37.09
Gene sequence:
>2076_bases ATGTCAAGAAGTACTCCTTTAAAAAAAGTTAGAAATATCGGTATTGCTGCTCACATTGATGCGGGTAAAACGACTACATC TGAAAGAATTCTTTTCTTTACAGGTATGAGTCATAAAATCGGTGAAGTTCATGATGGTGCTGCAACTATGGACTGGATGG AACAAGAGAAAGAGCGCGGGATTACTATCACTTCTGCGGCTACAACTTGTTTTTGGAAAGATCATCAAATCAATCTTATT GACACTCCAGGCCACGTGGATTTTACAATTGAAGTTGAAAGATCTATGCGTGTTCTTGATGGTGCTGTTGCGGTATTTTG TTCAGTGGGTGGGGTGCAGCCTCAAAGTGAAACAGTTTGGAGACAAGCAAATAAATATGGTGTTCCAAGAATAGTATTTG TAAACAAAATGGATAGAATCGGTGCAAATTTCTACAATGTAGAAGATCAAATTCGCAACCGTTTAAAAGCTAATCCAGTT CCACTTCAAATTCCAATCGGTGCTGAGGATAATTTTAAAGGCGTAATCGATCTTGTAACTATGAAAGCTTTAGTTTGGGA AGATGATACTAAGCCAACGGATTATGTAGAAAAAGAAATTCCAGCTGAACTTAAAGAAAAGGCAGAAGAATATCGCACAA AAATGATAGAAGCAGTTTCTGAAACTTCAGATGAGTTGATGGAAAAATATTTAGGCGGAGAAGAATTAAGCCTTGAAGAG ATTAAAACAGGGATTAAAGCAGGATGTTTAAGTCTTTCTATCGTTCCTATGCTTTGCGGTACAGCGTTTAAAAATAAAGG GGTTCAACCTTTACTTGATGCTGTTGTGGCTTATTTACCAGCTCCTGATGAAGTGGCAAATATCAAGGGTGAATATGAAG ATGGCACAGAAGTTTCTGTAAAATCAACTGATGATGGCGAGTTTGCAGGACTTGCATTTAAAATTATGACAGATCCATTT GTAGGACAACTTACTTTCGTGCGTGTTTATCGCGGTTGTTTAGAAAGTGGTTCTTATGCTTATAACTCAACTAAAGATAA AAAAGAAAGAATTGGTCGTTTGTTAAAAATGCACTCTAATAAAAGAGAAGAGATTAAAGTGCTTTACGCAGGCGAAATTG GTGCTGTTGTAGGACTTAAAGATACTTTAACAGGGGATACTCTTGCAAGTGAAAAAGATAAGGTAATCCTTGAAAGAATG GATTTTCCAGATCCCGTTATTTCTGTTGCAGTTGAGCCAAAAACTAAAGCTGATCAAGAAAAAATGTCTATTGCTTTAAA TAAATTAGCACAAGAAGATCCAAGTTTTAGAGTTTCAACTGATGAAGAAAGTGGCCAAACTATCATTTCAGGTATGGGTG AGTTACACCTTGAAATTATCGTTGATAGAATGCTTCGTGAATTTAAAGTTGAAGCTGAAGTAGGTCAACCACAAGTTGCT TATCGCGAAACTATTAGAAAAACTGTTGAACAAGAATACAAATATGCTAAACAATCAGGTGGTCGTGGCCAGTATGGACA TGTATTCTTACGCCTTGAACCGCTTGAGCCAGGTAGTGGATATGAATTTGTTAATGATATCAAAGGCGGGGTGATTCCAA AAGAATACATTCCTGCAGTTGATAAAGGTGTTCAAGAAGCATTACAAAATGGTGTTTTAGCAGGTTATCCTGTAGAAGAT GTTAAAGTAACTGTTTATGATGGAAGTTATCACGAAGTGGATTCATCTGAGATGGCGTTTAAGCTTGCTGCTTCTATGGG CTTTAAAGAAGGTGCTAGAAAAGCAGGTGCTGTGATCTTAGAGCCTATGATGAAAGTTGAAGTAGAAACTCCCGAAGATT ATATGGGTGATGTTATTGGAGATCTTAACAAACGCCGTGGTCAAGTAAATAGCATGGATGAGCGTGGTGGAAATAAAATC ATCACAGCATTTTGTCCTTTGGCTGAAATGTTTGGTTATTCTACTGATCTTAGAAGTCAAACTCAAGGTCGTGCGACTTA TTCTATGGAATTTGATCACTATGATGAAGTTCCTAAAAATGTTGCAGATGAAATCATCAAAAAAAGAAACGGTTAA
Upstream 100 bases:
>100_bases AAATAGCAAAGGTGCTTCATTTAAGAAGAAAGAAGATACTTATAAAATGGCTGAAGCAAATAAAGCATTTGCTCACTATC GTTGGTAAGAAGGAGTGTGT
Downstream 100 bases:
>100_bases ATTTTTTAGCGGGATTTTTCCCGCTTTCTGTCCTCGTAGCTCAGCAGGATAGAGCGCAAAATTCCTAATTTTGAGGCCGT GAGTTCGAATCTCGCCGTGG
Product: elongation factor G
Products: NA
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKDHQINLI DTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEE IKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPF VGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERM DFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVA YRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVED VKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKI ITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG
Sequences:
>Translated_691_residues MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKDHQINLI DTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEE IKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPF VGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERM DFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVA YRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVED VKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKI ITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG >Mature_690_residues SRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKDHQINLID TPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVP LQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEEI KTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFV GQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERMD FPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVAY RETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDV KVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKII TAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=697, Percent_Identity=44.4763271162123, Blast_Score=584, Evalue=1e-166, Organism=Homo sapiens, GI19923640, Length=728, Percent_Identity=40.1098901098901, Blast_Score=513, Evalue=1e-145, Organism=Homo sapiens, GI25306283, Length=449, Percent_Identity=42.9844097995546, Blast_Score=335, Evalue=1e-91, Organism=Homo sapiens, GI25306287, Length=292, Percent_Identity=51.3698630136986, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI4503483, Length=483, Percent_Identity=26.7080745341615, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI157426893, Length=155, Percent_Identity=36.7741935483871, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=38.6861313868613, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI310132016, Length=119, Percent_Identity=38.655462184874, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI310110807, Length=119, Percent_Identity=38.655462184874, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI310123363, Length=119, Percent_Identity=38.655462184874, Blast_Score=80, Evalue=7e-15, Organism=Escherichia coli, GI1789738, Length=702, Percent_Identity=64.957264957265, Blast_Score=928, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=482, Percent_Identity=26.3485477178423, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=39.4285714285714, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1788922, Length=153, Percent_Identity=37.2549019607843, Blast_Score=92, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17533571, Length=681, Percent_Identity=41.8502202643172, Blast_Score=538, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17556745, Length=725, Percent_Identity=31.0344827586207, Blast_Score=339, Evalue=3e-93, Organism=Caenorhabditis elegans, GI17506493, Length=481, Percent_Identity=26.8191268191268, Blast_Score=127, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17557151, Length=160, Percent_Identity=38.75, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71988819, Length=139, Percent_Identity=33.0935251798561, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=139, Percent_Identity=33.0935251798561, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=688, Percent_Identity=43.6046511627907, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6322359, Length=791, Percent_Identity=33.3754740834387, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324707, Length=503, Percent_Identity=27.4353876739563, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320593, Length=503, Percent_Identity=27.4353876739563, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323320, Length=156, Percent_Identity=37.8205128205128, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=147, Percent_Identity=36.0544217687075, Blast_Score=81, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324761, Length=130, Percent_Identity=33.8461538461538, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582462, Length=702, Percent_Identity=43.8746438746439, Blast_Score=598, Evalue=1e-171, Organism=Drosophila melanogaster, GI221458488, Length=727, Percent_Identity=34.3878954607978, Blast_Score=397, Evalue=1e-111, Organism=Drosophila melanogaster, GI24585711, Length=480, Percent_Identity=27.0833333333333, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24585713, Length=480, Percent_Identity=27.0833333333333, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24585709, Length=480, Percent_Identity=27.0833333333333, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI78706572, Length=155, Percent_Identity=36.1290322580645, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=37.0629370629371, Blast_Score=89, Evalue=1e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 76720; Mature: 76589
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERG CCCCCHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVW EEEEECCEEEEEECCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHH RQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVPLQIPIGAEDNFKGVIDLVT HHHHHCCCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH MKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEE HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEE KSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSN ECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC KREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERMDFPDPVISVAVEPKTKADQE CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHH KMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAV HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHCHH DKGVQEALQNGVLAGYPVEDVKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVIL HHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHC EPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQ CCHHEEEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCHHHC TQGRATYSMEFDHYDEVPKNVADEIIKKRNG CCCCEEEEEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERG CCCCHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVW EEEEECCEEEEEECCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHH RQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVPLQIPIGAEDNFKGVIDLVT HHHHHCCCCEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH MKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEE HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEE KSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSN ECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC KREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERMDFPDPVISVAVEPKTKADQE CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHH KMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVA HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAV HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCHHHHCHH DKGVQEALQNGVLAGYPVEDVKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVIL HHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHC EPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQ CCHHEEEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEHHHHHHHHHCCCCCHHHC TQGRATYSMEFDHYDEVPKNVADEIIKKRNG CCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA