| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237515
Identifier: 57237515
GI number: 57237515
Start: 463393
End: 464580
Strand: Reverse
Name: 57237515
Synonym: CJE0511
Alternate gene names: NA
Gene position: 464580-463393 (Counterclockwise)
Preceding gene: 57237519
Following gene: 57237513
Centisome position: 26.13
GC content: 30.39
Gene sequence:
>1188_bases ATGAATTACATTGAACTATTAAAAAATAATAAAAATATCAGAATATTGGCTTCGGTTCAGTTTATAGTATATTTTGGAGC ATGGTTTTCTCAAACGGGAGTTTTTACCCTTTTAGTCGAGCTTAATGCTCCTACTTGGGCAACAGCTACAAGTGCTATGC TTGCTTTTTTACCTGGAGTTTTGCTTGCTCCTATTAATGGGGTTATAGTAGAGAAAAATAAACCTAAAAAACTTTTACTC AGTATGATTAGCATAGAATTAATTTCTATTTTTTGTCTTATTTTTGTCACAAGTCTTAGTATGCTTTGGCTTTTGTTTAT TTTAATTTTCATAAGACTTTGTGTTGCTTCGATTTATTTTCAAGCTGAAATGAGTTTATTGGCCAAAATTTTAACCCCTC AAGAACTTAAACTCGCTAATGAAATGCACAGTGTCATTTGGGCGATTTCTTATACAGCAGGTATGGCAAGTGCGGGAATT TTTATTTATTTTCTAGGAGTTAAAACCGCTTTTTTATTTGACTGTATGCTTATACTCATAGGCATTTCTTTTTTAGTAAG ATTAAGCATTCCTGATTTTCATCACAAAACACAAAGTCGCTTTTTTACTATGATAAAAGAAGGATTTTTCTATGTTTTAA ATAATAAAATAATTTTTCATCTTATCTTGCTTCACGCTTTTATAGGTTTAACTGCTTATGAAACCTTGGTTACGCTTTTA GCACAACATCAATACAAAGAAGTTTTATCTGCTGCTTTAGTAATAGGGTTTTTAAATGCGGTACGTGCTTGTTCTTTAGC TATAGGGCCTATGGTTTTAAGCAAATTTATTAATAATAAAAATTTATTTTATATGTATCTTGGTCAAGGCTTGGGTATTA TACTTTGGGCTTTAACTCAATTTAATTTTTATATTTCTTTTTTAGGTTTAATTGGTGCAGGTTTTTTTACCTCAGCGCTT TGGGCTTATACCTACACCATGATACAAAAAAATGCTGACAAAGAATATCATGGTAGAGTGATCGCTTATACAGATATGAT TTATCTTAGTTTTAGCGCTATTATTTCAATGCTTATGGGCTTTTTATTTGAAATAGGCTTGAGTTTAAAACTGATTACAG GTTTATTGGGTATGATTTTTATCTTTGCGGCATTTTATTGGAAGTGGTTTTATAAAAAATATTTGTGA
Upstream 100 bases:
>100_bases GCTTCTTTTTTATCCAGTCTTTTCAAAATTTTTCCTTGTTTTTTTACATAATTAAAATAATTATAGCATTTAAAATATAA ATTATGCTATAGTTTCGCTT
Downstream 100 bases:
>100_bases AAATTCACAAATATTTTAAATTTTAAACAAATCTTGAAGATTTTTCATTGCTTCTTCATTGCTGATGGCATTATTTAGCT GCGATGAGCTTAATTCATTG
Product: transporter
Products: NA
Alternate protein names: Integral Membrane Protein; Facilitator Superfamily Protein; Transporter Facilitator Family; Methionyl-TRNA Formyltransferase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPTWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLL SMISIELISIFCLIFVTSLSMLWLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKIIFHLILLHAFIGLTAYETLVTLL AQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINNKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSAL WAYTYTMIQKNADKEYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLKLITGLLGMIFIFAAFYWKWFYKKYL
Sequences:
>Translated_395_residues MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPTWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLL SMISIELISIFCLIFVTSLSMLWLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKIIFHLILLHAFIGLTAYETLVTLL AQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINNKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSAL WAYTYTMIQKNADKEYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLKLITGLLGMIFIFAAFYWKWFYKKYL >Mature_395_residues MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPTWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLL SMISIELISIFCLIFVTSLSMLWLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKIIFHLILLHAFIGLTAYETLVTLL AQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINNKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSAL WAYTYTMIQKNADKEYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLKLITGLLGMIFIFAAFYWKWFYKKYL
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44871; Mature: 44871
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPTWATATSAMLAFLPGV CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH LLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSMLWLLFILIFIRLCVASIYF HHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGIFIYFLGVKTAFLFDCMLILI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKIIFHLILLHAFIGLTAYETLVTLL HHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINNKNLFYMYLGQGLGIILWALTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH FNFYISFLGLIGAGFFTSALWAYTYTMIQKNADKEYHGRVIAYTDMIYLSFSAIISMLMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHHHHHHHHH FLFEIGLSLKLITGLLGMIFIFAAFYWKWFYKKYL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPTWATATSAMLAFLPGV CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH LLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSMLWLLFILIFIRLCVASIYF HHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGIFIYFLGVKTAFLFDCMLILI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKIIFHLILLHAFIGLTAYETLVTLL HHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINNKNLFYMYLGQGLGIILWALTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH FNFYISFLGLIGAGFFTSALWAYTYTMIQKNADKEYHGRVIAYTDMIYLSFSAIISMLMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHHHHHHHHH FLFEIGLSLKLITGLLGMIFIFAAFYWKWFYKKYL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA