| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237485
Identifier: 57237485
GI number: 57237485
Start: 429793
End: 431019
Strand: Direct
Name: 57237485
Synonym: CJE0480
Alternate gene names: NA
Gene position: 429793-431019 (Clockwise)
Preceding gene: 57238718
Following gene: 57237486
Centisome position: 24.18
GC content: 25.59
Gene sequence:
>1227_bases ATGGAAAAAATCAAAAATTATAAACTTATCATCATTTTACTTAGTCTTGATTTGTTGGCTTTGCTTTATGGAATTTCAAC ACTGAGTATTAGTGCTGATGAAGCTGATATTTATTTTGGTGAGCAGGGTAAATCACTTATTTTTTCCCATAGTTTGCTTT ATTATATATCTCATTTTGGAACTTTTATTTTTGGGCAAAATGATTTTGGTTTAAGGCTTCCTTTTTTATTTTTTCATTTT TTAAGTTGTTTGCTTTTGTATTTGCTAGCTTTAAAATATACTAAAACTAAAATTGATGCTTTTTTTTCTTTATTGTTATT TGTTTTATTGCCGGGTACTGTTGCAAGTGCTTTACTGGTTAATGCCGCATCTTTGGTGATTTTTTTAACCCTTGCTATAT TATGTGCTTACGAATATGAAAAAAAATGGCTTTTTTATATATTATTGATTATAGTATTATTTGTTGATAAATCTTTTAAT ATTTTATTTTTAACTTTTTTCTTTTTTGGGATTTATAAAAGAAATGCTATTTTATTTACCTTATCTCTTGTTTTGTTTGG AGCGAGTATCAGTTTTTATGGTTTTGATACAGGTGGTCGTCCAAGAGGTTATTTTTTAGATACTTTAGGAATTTTTGCTG CATGTTTTTCTCCTTTGGTTTTTGTGTATTTTTTTTATACTATTTATCGTTTGACTTTTCAGAAATATAAAAATTTATTA TGGTTTTTAATGAGCGTAACATTTGTATTTTGTTTGTTGCTTTCTTTAAGACAAAAACTTTTTTTAGATGATTTTTTGCC TTTTTGTGTTATTTGCACTCCTTTGCTTATAAAAACTTTAATGCAAAGTTATAGGGTGAGATTACCAGTTTTTCGATTAA GGTATAAAATCTTTATAGAATGTTCTATAATTTTTTTGATATTTTGTTACTTTTTAATCGTCGCTAATCAATTATTGTAT TATTTTATAAACAATCCAAATCGTCATTTTGCCAATAATTATCATTTTACTAAAGAATTGGCGCTAGCATTAAAAAAACA AGATGTTTTAGAGCTTGCAACAGCCCCAAGTTTGCAAAAAAGATTGCGATTTTATGGAATAAAAAATAGCAATAAGTTTT ATTTAAAAGCTTTAAAACAAGCCGATAAGTATGATATGGACAAAAAAATTGTTAAAGTAAAACTTGGAAAATATGAAAAA GTATATCAGATTTTAAACTATGATTAA
Upstream 100 bases:
>100_bases CTTATAAAAACTAAAATCAATTTGATGTTAATTTTTAAGATATTTGATATTTGTATGATTTGCATTGATATTTTAAGTTT AATTTTGTAAAATTTTCATT
Downstream 100 bases:
>100_bases AGCTTTCAGTTTGTTAGAATTTGTGTTTATAATTCTTATTTTAGGTATAGTTTTTAATTTAGGCAGTCTTTACTTAAAAA AAGACAATTTACTAGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein OxaA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGKSLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHF LSCLLLYLLALKYTKTKIDAFFSLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFVYFFYTIYRLTFQKYKNLL WFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLY YFINNPNRHFANNYHFTKELALALKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKYDMDKKIVKVKLGKYEK VYQILNYD
Sequences:
>Translated_408_residues MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGKSLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHF LSCLLLYLLALKYTKTKIDAFFSLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFVYFFYTIYRLTFQKYKNLL WFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLY YFINNPNRHFANNYHFTKELALALKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKYDMDKKIVKVKLGKYEK VYQILNYD >Mature_408_residues MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGKSLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHF LSCLLLYLLALKYTKTKIDAFFSLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFVYFFYTIYRLTFQKYKNLL WFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLY YFINNPNRHFANNYHFTKELALALKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKYDMDKKIVKVKLGKYEK VYQILNYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47843; Mature: 47843
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGKSLIFSHSLLYYISHFG CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHH TFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFFSLLLFVLLPGTVASALLV HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFNILFLTFFFFGIYKRNAILFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH LSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFVYFFYTIYRLTFQKYKNLL HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLMQSYRVRLPVFRLRYKIFIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH CSIIFLIFCYFLIVANQLLYYFINNPNRHFANNYHFTKELALALKKQDVLELATAPSLQK HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH RLRFYGIKNSNKFYLKALKQADKYDMDKKIVKVKLGKYEKVYQILNYD HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGKSLIFSHSLLYYISHFG CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHH TFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFFSLLLFVLLPGTVASALLV HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFNILFLTFFFFGIYKRNAILFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH LSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFVYFFYTIYRLTFQKYKNLL HHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLMQSYRVRLPVFRLRYKIFIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH CSIIFLIFCYFLIVANQLLYYFINNPNRHFANNYHFTKELALALKKQDVLELATAPSLQK HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH RLRFYGIKNSNKFYLKALKQADKYDMDKKIVKVKLGKYEKVYQILNYD HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA