| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237476
Identifier: 57237476
GI number: 57237476
Start: 423905
End: 424861
Strand: Reverse
Name: 57237476
Synonym: CJE0470
Alternate gene names: NA
Gene position: 424861-423905 (Counterclockwise)
Preceding gene: 57237477
Following gene: 57237473
Centisome position: 23.9
GC content: 25.18
Gene sequence:
>957_bases ATGTTTTTATTAGATTTTTTAATATCATTGAGTTTTATTTTTGAAATTTCAGCTCTTGTGCTATCCTTTTACTTTAAAAA TTCAAAAATTTTCTTTTTGACTTTAGTATTACTAGGAGCTAAGCTGCCTTATTTTTATACAAGTTTTTTTCAAGCTAATT TATTTGTGGCTTTGTTTTTACCTATGATTTTTACTCTATTTTGCCTTGGAAAACATCATGTTTTAATTTTAAATAAAAAA AATATCGCCTCAATTACAACCCTTATTTTTATAGGCGTTTTAAGCATCATTTTACCTAGAAATACTACTTTCAATAGCGC TGGTTTAGAATTCCATTTTATTACATTAAATTTTTTTAAACCTGTGAGTGAATTAGGATTTTTATTTTTTTTAGTCGGCT TAATACTCATTTTTATCAAAACTTTTAAAACTAAAGAATATTATCTTCTTATCGCATTTTTTGCTGCATATTTTCAGTTT TTATTCCAAGAAGGAACAGGAATAAGATATTTTGAATTTGCAAGTTTGGTTTTTTGTTTTTATCTTTTAAATCACGCTTA TAGGTTAGCTTTTTTTGACACCTTAACAAAGCTACCCAATGAAAAAAGCCTTACACGCTTTACAAAAGGAAAAAACAACT ATATCATTGCCTTGCTTCATTTTAATGAACTAAAAGATACCAAAGAAAGCTATACCAAACTCATTTTAAAACAAATTGCA AAAATTTTAAAACGCTTTAGAGCAAAAATTTTTATCGTAGAAAATGATTTTATTTTAATTTTTAATGATAAAAATCAAGC TTTAAATCATCTTGCTTTTTTAGAATCCACCTTGAAAAACACGGAATTTAATTTAGAAAATGAAAATTTTAAACCGGATT TTAAATTGATTTGGCAAGAAAGTGAAGAAAATTTGGATAAAAATTTACAAAGTCTAAGAGCAAGACTCTTAGACTAA
Upstream 100 bases:
>100_bases AGAACAAACCATACAAGATGAAATTGCTAAATTTAAATAAAACCCGCTTTTAAGCTTTTTTCTATACAATTATCACTTTT ATTAAAATCAAGGATTTGAA
Downstream 100 bases:
>100_bases AAAATTATTTTTCGTTCGCTTCAACTTCGATATTTAAATTAATATCATCACTTAAAGTAATAGTTGAAGTACTTGTTGCA AATTTAAAATCAGAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFLPMIFTLFCLGKHHVLILNKK NIASITTLIFIGVLSIILPRNTTFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQF LFQEGTGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIALLHFNELKDTKESYTKLILKQIA KILKRFRAKIFIVENDFILIFNDKNQALNHLAFLESTLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD
Sequences:
>Translated_318_residues MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFLPMIFTLFCLGKHHVLILNKK NIASITTLIFIGVLSIILPRNTTFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQF LFQEGTGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIALLHFNELKDTKESYTKLILKQIA KILKRFRAKIFIVENDFILIFNDKNQALNHLAFLESTLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD >Mature_318_residues MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFLPMIFTLFCLGKHHVLILNKK NIASITTLIFIGVLSIILPRNTTFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQF LFQEGTGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIALLHFNELKDTKESYTKLILKQIA KILKRFRAKIFIVENDFILIFNDKNQALNHLAFLESTLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37401; Mature: 37401
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH PMIFTLFCLGKHHVLILNKKNIASITTLIFIGVLSIILPRNTTFNSAGLEFHFITLNFFK HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHC PVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQFLFQEGTGIRYFEFASLVFCF CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIALLHFNELKDTKESYTKLILKQIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH KILKRFRAKIFIVENDFILIFNDKNQALNHLAFLESTLKNTEFNLENENFKPDFKLIWQE HHHHHHCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEC SEENLDKNLQSLRARLLD CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH PMIFTLFCLGKHHVLILNKKNIASITTLIFIGVLSIILPRNTTFNSAGLEFHFITLNFFK HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHC PVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQFLFQEGTGIRYFEFASLVFCF CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIALLHFNELKDTKESYTKLILKQIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH KILKRFRAKIFIVENDFILIFNDKNQALNHLAFLESTLKNTEFNLENENFKPDFKLIWQE HHHHHHCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEC SEENLDKNLQSLRARLLD CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA