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The map label for this gene is yedY [H]

Identifier: 57237434

GI number: 57237434

Start: 383860

End: 384753

Strand: Reverse

Name: yedY [H]

Synonym: CJE0428

Alternate gene names: 57237434

Gene position: 384753-383860 (Counterclockwise)

Preceding gene: 57237435

Following gene: 57237433

Centisome position: 21.64

GC content: 34.45

Gene sequence:

>894_bases
ATGCTTATAACACCTGAAAAACTTTATAAACAAAGGAGAAGTTTTTTAAAACTTGGAGCGGGTGCTTTAATAAGTTCAAG
CGTGCTTGCTTCTAAACTATCTGCTTTAAATTTCACAAGCGATACTAATCCAAACAAACTTGAAATCAGCGATGAAGAAC
TGGCTACAAATTATGTCAATTTTTATGAATTTTCAACAGATAAAAGAAAGGCTGTATCATTGGCACAAAATTTCAATACT
CAAAATTGGAAAATCGATATCAGTGGAGAAATAGAAAAACCTTTAACTTTAAGCATGGAAGATATTTTAAAATTTCCACT
AGAAGAAAGAATTTATCGTTTTCGCTGTGTTGAAACTTGGTCTATGGTGGTACCTTGGGTAGGCTTTGAATTGCGTCGTT
TGATTGAAATGGCAAAACCTACAAGCGAGGCAAAATTTGTTAAATTCACCACTCTTTTAGACAAGAGTCAATTTCCCGAT
CAAGACGCTTTATTTCCAACTATAGACTATCCTTATGTAGAAGGACTTCGCATGGATGAAGCTATGCATCCTCTTACCTT
GCTTGCAGTAGGAATGTATCAAAAAGCCTTAAAGCCTCAAAATGGCGCTCCAATACGCCTTGTTGTTCCTTGGAAATATG
GCTTTAAAAGTATTAAATCTATAGTTAAAATAGAATTTACCAAAGAACAGCCTAAATCCACTTGGGAAAGTTACGCTCCA
AGTGAATATGGTTTTTATGCTAACGTCAATCCTAATGTTTCTCATCCTAGATGGTCTCAAGCTAACGAGAGGGCTTTAGG
AGACTTCTTTACCAAACCTACTTTAATGTTTAATGGATATGAAAAAGAAGTGGCAAGTTTATATAAAAACATGGACTTGA
AAGTGAATTTTTAA

Upstream 100 bases:

>100_bases
GAAATATTCTACAATATAGAACTTGAAAAAATCACACAAAATTAATCCTGTATTAACATTGTTATAGTTTAATAATAAAA
ATTTTTAATAAGGAAAAATT

Downstream 100 bases:

>100_bases
TGCAGACAAAATACTTTAAATTTCTTGCTTATTTTAGCTTTATCATAAGTTTAATCTATGGCTTTTATCATATCATAAAA
GCCTTTGATTTTGTAAAAGA

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLITPEKLYKQRRSFLKLGAGALISSSVLASKLSALNFTSDTNPNKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNT
QNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYQKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF

Sequences:

>Translated_297_residues
MLITPEKLYKQRRSFLKLGAGALISSSVLASKLSALNFTSDTNPNKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNT
QNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYQKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
>Mature_297_residues
MLITPEKLYKQRRSFLKLGAGALISSSVLASKLSALNFTSDTNPNKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNT
QNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYQKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=261, Percent_Identity=57.4712643678161, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 34260; Mature: 34260

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITPEKLYKQRRSFLKLGAGALISSSVLASKLSALNFTSDTNPNKLEISDEELATNYVN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHH
FYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETW
EEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEECHHHHHHCCHHHHHHHHHHHHHH
SMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPDQDALFPTIDYPYVEGLRMDE
HHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHH
AMHPLTLLAVGMYQKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHEEEECCCCCHHHHHHCCC
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MLITPEKLYKQRRSFLKLGAGALISSSVLASKLSALNFTSDTNPNKLEISDEELATNYVN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHH
FYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDILKFPLEERIYRFRCVETW
EEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEECHHHHHHCCHHHHHHHHHHHHHH
SMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPDQDALFPTIDYPYVEGLRMDE
HHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHH
AMHPLTLLAVGMYQKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHEEEECCCCCHHHHHHCCC
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]