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The map label for this gene is yqaA [C]

Identifier: 57237392

GI number: 57237392

Start: 346688

End: 347131

Strand: Reverse

Name: yqaA [C]

Synonym: CJE0386

Alternate gene names: 57237392

Gene position: 347131-346688 (Counterclockwise)

Preceding gene: 57237393

Following gene: 57237389

Centisome position: 19.53

GC content: 27.25

Gene sequence:

>444_bases
ATGTTTGATTTTTTATATAATGATATTAGCTATTTGGGGCTTTTCATGGTGTGTTTTCTTTCAAGCACACTATTACCCTT
AGCAAGTGAAGCCTTTGTTTTAGGCTTTATAAAACTTGATTTTAATCCGAATTTGGTACTTATCATAGCCACTTTGGGTA
ATACCTTAGGAAGTTTAAGTACTTATGCTTTAGCGTATTTTGGAAAAGAAAAAATTTTAGAAAAATACTTTAGCAAATCC
TTAAAAAAATTAGAAAATTTCAATGCTAATTTTGCTAAATTTGGAAGTATATTTGCTTTTTTTACTTTTTTACCTTTAGT
AGGAGATCTTTTTGCCTTGGGACTTGGTTTTGCGAAATATTCTTTTTTAAAAACTATATTTTTTATCTTACTTGGAAAAT
TAAGTCGTTATGCTTTCATAATTTTCATAGCAAACTCCTTTTAA

Upstream 100 bases:

>100_bases
ATCTTGGAATTTTAAATTTGTATTTTGAAATTATCAAATCTTTTTTATTTCCTATCCATCTTTTTATTTTGTTTATTTTA
ATGCGTAAAAAAGAGTTTTA

Downstream 100 bases:

>100_bases
AAACTTCTCTTTTATAAGTTTTAAAAGCTTTGCATTGTCTACATTTTTTAGAATTTTAACACAATTTTTAGTGCTTAAAT
CCACCCCCATACTCATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPNLVLIIATLGNTLGSLSTYALAYFGKEKILEKYFSKS
LKKLENFNANFAKFGSIFAFFTFLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF

Sequences:

>Translated_147_residues
MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPNLVLIIATLGNTLGSLSTYALAYFGKEKILEKYFSKS
LKKLENFNANFAKFGSIFAFFTFLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF
>Mature_147_residues
MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPNLVLIIATLGNTLGSLSTYALAYFGKEKILEKYFSKS
LKKLENFNANFAKFGSIFAFFTFLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=137, Percent_Identity=29.9270072992701, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16577; Mature: 16577

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPNLVLIIATLGNTLGSLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHH
TYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFTFLPLVGDLFALGLGFAKY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLKTIFFILLGKLSRYAFIIFIANSF
HHHHHHHHHHHHHHHHHEEEEEEECCC
>Mature Secondary Structure
MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPNLVLIIATLGNTLGSLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHHHHHHH
TYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFTFLPLVGDLFALGLGFAKY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLKTIFFILLGKLSRYAFIIFIANSF
HHHHHHHHHHHHHHHHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]