Click here to switch to the map view.

The map label for this gene is rpmF

Identifier: 57237381

GI number: 57237381

Start: 336676

End: 336822

Strand: Reverse

Name: rpmF

Synonym: CJE0375

Alternate gene names: 57237381

Gene position: 336822-336676 (Counterclockwise)

Preceding gene: 57237382

Following gene: 57237380

Centisome position: 18.95

GC content: 40.14

Gene sequence:

>147_bases
ATGGCAGTACCAAAGAGAAGAGTGAGCAAAACTCGTGCAGCTAAACGCAGAACTCACTATAAAGTTAGTCTTCCTATGCC
TATAAAAGACAAAGATGGAAGCTACAAAATGCCTCACCGTGCGAATCCAACAACTAAGGAATATTAA

Upstream 100 bases:

>100_bases
ATTTAATAGAAGTTGCTATTAGCGAGCTTGAAGCTTATTTGAGTGATTATTTTTATTGTATAAATTGCAATAATTAATTA
AATTTTATAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
AATCAATGATTAACATTGCCATTGATGCAATGGGTGGTGATTTTGGAGAAAAACCCATTATAGAAGGCGTTTTAAAGGCA
CTAGAAGCAAAACCTTTTAA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTTKEY

Sequences:

>Translated_48_residues
MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTTKEY
>Mature_47_residues
AVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTTKEY

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_CAMJ8 (A8FKB9)

Other databases:

- EMBL:   CP000814
- RefSeq:   YP_001481883.1
- ProteinModelPortal:   A8FKB9
- SMR:   A8FKB9
- STRING:   A8FKB9
- GeneID:   5618285
- GenomeReviews:   CP000814_GR
- KEGG:   cju:C8J_0307
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- ProtClustDB:   PRK01110
- BioCyc:   CJEJ407148:C8J_0307-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 5628; Mature: 5497

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTTKEY
CCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
AVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTTKEY
CCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA