| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is bla [H]
Identifier: 57237350
GI number: 57237350
Start: 309148
End: 309909
Strand: Direct
Name: bla [H]
Synonym: CJE0344
Alternate gene names: 57237350
Gene position: 309148-309909 (Clockwise)
Preceding gene: 57237346
Following gene: 57237358
Centisome position: 17.39
GC content: 26.9
Gene sequence:
>762_bases ATGAAAAAAATAACTTTATTTTTACTTTTCTTAAATTTAGTGTTTGGGCAAGATAAGATATTAAATAATTGGTTTAAAGA GTATAATACAAGCGGCACTTTTGTTTTTTATGATGGAAAAACTTGGGCGAGTAACGACTTTTCAAGGGCTATGGAGACTT TCTCTCCCGCTTCCACTTTTAAAATTTTTAATGCTCTAATTGCACTTGATAGTGGTGTGATAAAAACTAAAAAAGAAATT TTTTATCACTATAGAGGTGAAAAAGTATTTTTATCTTCTTGGGCGCAAGATATGAATTTAAGTTCAGCTATAAAATATTC TAATGTTCTTGCTTTTAAAGAAGTGACAAGAAGAATTGGTATCAAAACTATGCAAGAATATTTAAACAAGCTTCATTATG GTAATGCTAAAATTTCCAAGATCGATACTTTTTGGCTTGACAACTCACTAAAAATAAGCGCTAAAGAACAAGCAATTTTG CTTTTTAGACTTTCACAAAATAGCTTACCTTTTTCTCAAGAAGCAATGAATAGTGTTAAGGAAATGATTTATTTAAAAAA TATGGAAAATTTAGAGCTTTTTGGAAAAACAGGTTTTAATGATGAGCAAAAAATTGCTTGGATTGTAGGTTTTGTGTATT TAAAAGATGAAAATAAATATAAGGCTTTCGCGCTAAATTTAGATATTGATAAATTTGAAGATTTATATAAAAGAGAAAAA ATTTTAGAAAAATATTTAGATGAACTTGTAAAAAAAAGTTAA
Upstream 100 bases:
>100_bases TGCAATTTTAGAAAATTTCAGTTCATGTTAAAGGATATTTAAAGAAAATAAAGCTTTAAAAAGTATTTTGTTTAAAATTA TTTAAATAGAAAGATATTTT
Downstream 100 bases:
>100_bases AAATGATGGCTAGTGAGTATTTCGTAAAATGCAAAAATACTTAATTGTATGATTTGCGTACACTTAAAGTACTCATTAAA AAATTAAATTTTTGCTCTTA
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-lactamase PSE-2 [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEI FYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVTRRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDKFEDLYKREK ILEKYLDELVKKS
Sequences:
>Translated_253_residues MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEI FYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVTRRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDKFEDLYKREK ILEKYLDELVKKS >Mature_253_residues MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEI FYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVTRRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDKFEDLYKREK ILEKYLDELVKKS
Specific function: Hydrolyzes both carbenicillin and oxacillin [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-D beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR002137 - InterPro: IPR001460 [H]
Pfam domain/function: PF00905 Transpeptidase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29651; Mature: 29651
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPASTF CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHH KIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVTRRIG HHHHHHHHHCCCCHHHHHHHHEEECCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHC IKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAILLFRLSQNSLPFSQEAMNSVK HHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHH EMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDKFEDLYKREK HHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHH ILEKYLDELVKKS HHHHHHHHHHHCC >Mature Secondary Structure MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWASNDFSRAMETFSPASTF CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHH KIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSSAIKYSNVLAFKEVTRRIG HHHHHHHHHCCCCHHHHHHHHEEECCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHC IKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAILLFRLSQNSLPFSQEAMNSVK HHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHH EMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDENKYKAFALNLDIDKFEDLYKREK HHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHH ILEKYLDELVKKS HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3126705; 11188693 [H]