| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237333
Identifier: 57237333
GI number: 57237333
Start: 290391
End: 291140
Strand: Direct
Name: 57237333
Synonym: CJE0326
Alternate gene names: NA
Gene position: 290391-291140 (Clockwise)
Preceding gene: 57237332
Following gene: 57237334
Centisome position: 16.33
GC content: 28.0
Gene sequence:
>750_bases ATGAAGAATAAGATTTTTTATGTTCTTGTCTTAGCCTTTTTGGTTTTTATATCTTTTTATTATGGAGGACTTATCAAGCA AAATGTTCTCCGTGTTAATGATTTTGTTATAGGTAATTTTTATAATATTAAAGATTATTTGGGAAAAAAAATTTCAGAAC ACTTTAATCAAGCAAATCAAATTCAGCAACTAAAAGCTAGAAATAAAGAATTAGAAGATATTGCTGTAAAGGTAACTAGT TTTGCAAATCAATTAAATCGTATTTTAGAGGATCAAAATTCTACAAAATATTTACCTCAAGTTTCTTTAACTAGAGTTAT TTCTTACGTTCAATTGAATGATTATAAAAAATTATGGTTAGATTGGAGCAAAATTCCAGTTGGTAAAAATCGTGGTTTAA TATATCAAGGATATACTGCAGGTATAGCTATTAATAAAAATGGTAGAGCAATGGCTCTCTTACAAGGTGATGATCAGTGT GTTTTTTCTGTTTATATAGGAAAATCCAAAGCTCCAGGTTTAATCCAGGGTGAAGATGGCAGGATTGTGGTTAAATTTAT TCCAAAATGGGCAAAAATTAATACCGGAGATGAAATTTTAACAAGTGGACTTGATAATATTTTCTTTTCAGATATACCTG TCGGTATTGTGAATAGAGTTAATGATGAAGATATGTATCAAAGTGTAGAAGTAAAGCCTTATGTTAAGATTAGTATTCCT GCTTATTTATATGTAGTAGATAATTTATAA
Upstream 100 bases:
>100_bases GTACGTTTGCCAGTTTATATCGCAGATGAACCGCTTTTAGCTGTAGCAAAAGGAACGGGTAAAGCTTTAGAGGAAATTTC ATTATTGCAACAATTAACCA
Downstream 100 bases:
>100_bases GTCAAGGATTAGACTTTTTAAAAATTTTCTATATTTTTGCTAATTATTATAACTTTGTTTAATGCTAAAAATTTTGTTAA ATTATCAAATAAATGTTTAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Periplasmic Protein; Rod Shape Determining Protein MreC; Rod Shape-Determining Protein Mrec; Hemagglutinin/Hemolysin-Related Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIKDYLGKKISEHFNQANQIQQLKARNKELEDIAVKVTS FANQLNRILEDQNSTKYLPQVSLTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVNRVNDEDMYQSVEVKPYVKISIP AYLYVVDNL
Sequences:
>Translated_249_residues MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIKDYLGKKISEHFNQANQIQQLKARNKELEDIAVKVTS FANQLNRILEDQNSTKYLPQVSLTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVNRVNDEDMYQSVEVKPYVKISIP AYLYVVDNL >Mature_249_residues MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIKDYLGKKISEHFNQANQIQQLKARNKELEDIAVKVTS FANQLNRILEDQNSTKYLPQVSLTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVNRVNDEDMYQSVEVKPYVKISIP AYLYVVDNL
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28381; Mature: 28381
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIKDYLGKKISEHFNQANQ CCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECEECHHHHHHHHHHHHHHHHHH IQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVSLTRVISYVQLNDYKKLWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEE DWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQCVFSVYIGKSKAPGLIQGEDG EHHHCCCCCCCCEEEECEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCC RIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVNRVNDEDMYQSVEVKPYVKISIP EEEEEECCCCCCCCCCHHHHHHCHHHHHHCCCCHHHHHCCCCHHHHHHCCCCEEEEEECC AYLYVVDNL EEEEEEECC >Mature Secondary Structure MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIKDYLGKKISEHFNQANQ CCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECEECHHHHHHHHHHHHHHHHHH IQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVSLTRVISYVQLNDYKKLWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEE DWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQCVFSVYIGKSKAPGLIQGEDG EHHHCCCCCCCCEEEECEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCC RIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVNRVNDEDMYQSVEVKPYVKISIP EEEEEECCCCCCCCCCHHHHHHCHHHHHHCCCCHHHHHCCCCHHHHHHCCCCEEEEEECC AYLYVVDNL EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA