| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237271
Identifier: 57237271
GI number: 57237271
Start: 235727
End: 236689
Strand: Reverse
Name: 57237271
Synonym: CJE0261
Alternate gene names: NA
Gene position: 236689-235727 (Counterclockwise)
Preceding gene: 57237272
Following gene: 57237270
Centisome position: 13.31
GC content: 30.63
Gene sequence:
>963_bases ATGAATTTGGATTTTTTAAATGAGTTTAAGTTAAAAAATAAAGATTTAAACGAGAAATTAGAGTTTTTAATCCCTGATTT TTTAGTTAAAAAAGCAATAACTATTATTTATGCAAATGGTGGAAGTGGAAAAAGTTATTTAAGTGCCGCCATTTCTAAAA CACTTTGCAAAGATACAAGGGTTAAAAGCATCGTTTATGTTGACATGGATAATCCTTTAAATGTTTTAAATGAAAGAGGT TTTGGTGAACTTATTTTAAATGAAAGCAAATTCACTTATATTCACAGATCAAGCTTAAAAACTTCAGCTTATGAGCTTTT AGAAATGATTGAAGGCAAAGGCGTAGCAGGAAGCTATGAAGGGGTTTTATTTGTACTTGATTCTTTACGCAATTTTGCAG ATATTGATAATGATACTAAAATGATGTCTTTAATGTCTTTACTCATGAATTTAAGAGAATGTGGGGCAACCATTATGGCT TTACACCATTCTACAAAAGATGGCAGAGCTTTTAAAGGCTCAAATCATATTAGAAACTCAAGTGATTGCATGTATTTTTT ACAAAAAGTGGCTAACTTAGAACAAGGCTTTGAAGTATTGCTTAGTGTGCAAAAAGAAAGAGCAGGAATTAAAGATCAAG CCTTTTTTATCAATACAAAAACTCTAAATATTAAAAACACCGACTTGCAAAACGCTAAAATCAGCGATAAAGAAGAAGCT TTTATAGATAAAGTTTTAAAGCTTTTAAACGAAAAAAGCCTAAGCACAAGTGAGATTTTATCGGCTCTTGATGTAAGTAG GAGTGATAATTTTTCAAGGAATACTTTAGAGAAATTTAAAGGTGTTTTTTGGGAAAGTGAGCTTAGCGGAGAGAATGGTC GCACTTTTGTTTGGAAAAGTTTAAAAGCTGACAATAAAAACAGCAACGACAAAGAATTAAGCTTATTTGGAGATGAGTTA TGA
Upstream 100 bases:
>100_bases AAAAATTTTAACATAAAAATGAAATATGTTAAAAAAGCCAAAAAATTTAACAAAGTCCATTGATTTAATGGGCTTGATTA AGTTTTAGCAAGGAAAAAAG
Downstream 100 bases:
>100_bases AATTTAACCCTCCAAGCAAAGAAGATTTAATTAAAGCCATTGATGAGTTTAATGCTAAAAACTCTTGCTCTATCCCTTAT TTTATAGCAGATAGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDTRVKSIVYVDMDNPLNVLNERG FGELILNESKFTYIHRSSLKTSAYELLEMIEGKGVAGSYEGVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMA LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEA FIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELSGENGRTFVWKSLKADNKNSNDKELSLFGDEL
Sequences:
>Translated_320_residues MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDTRVKSIVYVDMDNPLNVLNERG FGELILNESKFTYIHRSSLKTSAYELLEMIEGKGVAGSYEGVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMA LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEA FIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELSGENGRTFVWKSLKADNKNSNDKELSLFGDEL >Mature_320_residues MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDTRVKSIVYVDMDNPLNVLNERG FGELILNESKFTYIHRSSLKTSAYELLEMIEGKGVAGSYEGVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMA LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEA FIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELSGENGRTFVWKSLKADNKNSNDKELSLFGDEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36132; Mature: 36132
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDTR CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCC VKSIVYVDMDNPLNVLNERGFGELILNESKFTYIHRSSLKTSAYELLEMIEGKGVAGSYE CCEEEEEECCCCHHHHHCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC GVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMALHHSTKDGRAFKGSNHIRNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHEEHHCCCCCCCCEECCCCCCCCC SDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHH FIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELSGENGRTFVWKS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE LKADNKNSNDKELSLFGDEL CCCCCCCCCCCEEEECCCCC >Mature Secondary Structure MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGKSYLSAAISKTLCKDTR CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCC VKSIVYVDMDNPLNVLNERGFGELILNESKFTYIHRSSLKTSAYELLEMIEGKGVAGSYE CCEEEEEECCCCHHHHHCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC GVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMALHHSTKDGRAFKGSNHIRNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHEEHHCCCCCCCCEECCCCCCCCC SDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFINTKTLNIKNTDLQNAKISDKEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHH FIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTLEKFKGVFWESELSGENGRTFVWKS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE LKADNKNSNDKELSLFGDEL CCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA