| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237247
Identifier: 57237247
GI number: 57237247
Start: 220898
End: 221530
Strand: Reverse
Name: 57237247
Synonym: CJE0236
Alternate gene names: NA
Gene position: 221530-220898 (Counterclockwise)
Preceding gene: 57237248
Following gene: 57237246
Centisome position: 12.46
GC content: 33.81
Gene sequence:
>633_bases ATGAACGAACTTGGCATCATTTGCGACATTAAAGACAATAAAGCTAAGGTTGCTATTGGAGATATGGTAACGGATTTTTT AAGTGTTTTTCAAAGTCTAGCTAATTCTTATGCAGTGAGCTTTTCTCCTTTAAGAATAGGAGAGCAAGTATTAGTCATAC CTGTGCGTGGGGATTTAAATAGTGGAGTTATTTTGCGTGGTCTTTACCAAGAAAAACATAGAGCAAAAAATACAGATGAA AATACTTTTAATATAGATTTTGAAGATGGAACGCATTTAGAATACAACTCTAAGAGTAGCACTTTAAAACTTGATGTGGT TAAAAATATAAATATCGCTTGTGTAGATAAAACCACCCATAACCAAAACAACACCTTAAATACTAAAAATCATACTACAA ACGCTAATACCATAACGCTTAATGCTCCAAGTATTAATTTAAATGGTAATACTCAAATTGCAGGAGCAATTTCTACAAGT GGCGAAGGTGGGGCAAGTGGTACTTTTAGCATAAAAGGAAATTTAAACTTAATAGGCAATTTACAAGTTAGCGGAAATAT AAGCGATAGCAAAGGTGATTTAACAAATCATACCCATTCTTGTACTTGTGGTGCCACAGCTTCGCCAAGATAG
Upstream 100 bases:
>100_bases TTGCAGTGGGTGGTTTTGCAGCTTATATGGGGACAGATGCATTGCTTAAAATTGAGCAACTTGTAGAAAAGTTAATTAAT AAAAAAATGGAAAAACTATA
Downstream 100 bases:
>100_bases GAAAAACTATGAAAGAATTATTTTTGCTTTTATTTTCATTAGTCTTTTTTATGCTCTTTTGCATGGGGGCATTTTATGCT TTTTTAAACCTAAACTTTTT
Product: baseplate assembly protein V
Products: NA
Alternate protein names: Phage P2-Like Baseplate Assembly Protein; Phage Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpV
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDE NTFNIDFEDGTHLEYNSKSSTLKLDVVKNINIACVDKTTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTS GEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR
Sequences:
>Translated_210_residues MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDE NTFNIDFEDGTHLEYNSKSSTLKLDVVKNINIACVDKTTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTS GEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR >Mature_210_residues MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDE NTFNIDFEDGTHLEYNSKSSTLKLDVVKNINIACVDKTTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTS GEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22394; Mature: 22394
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLN CCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEEECCCCC SGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTLKLDVVKNINIACVDKTTH CCEEEEEHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCEEEEEECCCC NQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTSGEGGASGTFSIKGNLNLIGN CCCCEECCCCCCCCCCEEEEECCEEEECCCEEEEEEEECCCCCCCCEEEEEECCEEEEEE LQVSGNISDSKGDLTNHTHSCTCGATASPR EEEECCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPLRIGEQVLVIPVRGDLN CCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCEEEEEEEEECCCEEEEEEECCCCC SGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTLKLDVVKNINIACVDKTTH CCEEEEEHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCEEEEEECCCC NQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTSGEGGASGTFSIKGNLNLIGN CCCCEECCCCCCCCCCEEEEECCEEEECCCEEEEEEEECCCCCCCCEEEEEECCEEEEEE LQVSGNISDSKGDLTNHTHSCTCGATASPR EEEECCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA