| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237244
Identifier: 57237244
GI number: 57237244
Start: 219248
End: 220414
Strand: Reverse
Name: 57237244
Synonym: CJE0233
Alternate gene names: NA
Gene position: 220414-219248 (Counterclockwise)
Preceding gene: 57237245
Following gene: 57237243
Centisome position: 12.4
GC content: 32.65
Gene sequence:
>1167_bases ATGAGTGAGCTTTTAAGTGCAAATGATAGCTATTTTAAACAAAGCTTTTTAAAGGATATCCCTTATCCACAAATCATAGA AGAGCTTGATTATGAAAAGCTTTTAAAAGCCTATGAAGAACTTTTTAAAAGCTTTTTAAAAGATAATGTAGAGCTTTTAG AATCTGACCCTTTTAAAGCCATTTTAGAAGCTTTAGCTTATAGAGAAATGATAATTAGAGCAAGAATTAATGAGAGTATA AAAGCAACTTATCTTCATTATGCAAAGGGAAGTGATTTAGATAATGTAGTAGCTAATGGCTATTTGATACAAAGGCTTAA AGGGGTTAAGCCCACAGCTAAAGTAGAGTTTGAATTAAATACTTTACTTACCTATGATGTCATCATCCCAAAAGGTGCAA TTTTTTCAAATGAAAAAGCAGACCTTGCCACTTTAAAAGAAGAAGTGGTGATTAAAAAAGGGCAAAGTAAAGCACAAGGT ATTTTAGAACTTAATGAATTTATTCAAAGCAAAGAAAGTAAAACCGAGTTTTTACAAACCCCACTGCCTTTTATAGCTAA GATTAAACAACTAGAATTTTTCAAAGGTGGAGCCAGTGAAGAAAGTGATGAAGCCTTAAGAGAAAGGGCTGTAATGAGTG TACATCGCTTTTCAACCGCAGGAAGTGAAAAAGGCTATATCTATCACGCTTTAAGCGCAAGTGCAAAAGTAGCTTCCATA AAAGCTTTAAACAATGGAGCAGGAAAAGTAAGAGTTATCATTAAAAGTGAAGATGAATTAAGCGTTGATGTGGTTAAAGA GTATTTAAGTGCAGATGAGCGAAGACCTTTAACTGATGAAGTCAGCGTTGAGTTAGCTAAAAAAAGAGAGTTTATCGTAG ATGCCAAACTTTTGCTTTTAGAATTAAGCCGTGCTAATGAAATAAGTGAAAAGATTAATGCTTTGCAAAAGGACTTTGAT TTAAGTGTGGATTTAGCACTGGGATTTATTTATAAATGTCTTCATCAAGACGGAGTTTATAAAAGCGAAATTTTAAGCAT TAAAGAAAAAATCATAAATGAAGAAGAGCAAGAATTAAAAGACTTACCTTTAGCAAACATAATAATAGCTGATGATGAGT TTGCAACCCTTAGCTTTTCACTTAGTTATGAAAAGGCGGTGCTATGA
Upstream 100 bases:
>100_bases TAAAGCTAAAAGGTGTGAGACTTAATGAGTGTAAAGACAATAAATTAAGCATTACCTTGCTTTTTGAAAATTATGGGGAT TTAACAATGGAGCTAGGCAA
Downstream 100 bases:
>100_bases ATACACTAATACTAAACCACCATCCAAAACAAAGCAAAGCCATTGATTTAAGTGCTAAAACAAGATTTGAAGATTTAAAT TTAGCTAGTATCACAAATCT
Product: baseplate assembly protein J
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate J-Like Protein; Baseplate J-Like Protein; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Phage Baseplate Protein; Phage Baseplate-Like Protein
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKAILEALAYREMIIRARINESI KATYLHYAKGSDLDNVVANGYLIQRLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQG ILELNEFIQSKESKTEFLQTPLPFIAKIKQLEFFKGGASEESDEALRERAVMSVHRFSTAGSEKGYIYHALSASAKVASI KALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFD LSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELKDLPLANIIIADDEFATLSFSLSYEKAVL
Sequences:
>Translated_388_residues MSELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKAILEALAYREMIIRARINESI KATYLHYAKGSDLDNVVANGYLIQRLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQG ILELNEFIQSKESKTEFLQTPLPFIAKIKQLEFFKGGASEESDEALRERAVMSVHRFSTAGSEKGYIYHALSASAKVASI KALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFD LSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELKDLPLANIIIADDEFATLSFSLSYEKAVL >Mature_387_residues SELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKAILEALAYREMIIRARINESIK ATYLHYAKGSDLDNVVANGYLIQRLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQGI LELNEFIQSKESKTEFLQTPLPFIAKIKQLEFFKGGASEESDEALRERAVMSVHRFSTAGSEKGYIYHALSASAKVASIK ALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDL SVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELKDLPLANIIIADDEFATLSFSLSYEKAVL
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43800; Mature: 43669
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKA CCCHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH ILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYLIQRLKGVKPTAKVEFELN HHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE TLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQGILELNEFIQSKESKTEFLQT HEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHC PLPFIAKIKQLEFFKGGASEESDEALRERAVMSVHRFSTAGSEKGYIYHALSASAKVASI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHH KALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLL EEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELSRANEISEKINALQKDFDLSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH DLPLANIIIADDEFATLSFSLSYEKAVL HCCCEEEEEECCCEEEEEEEECHHHHCC >Mature Secondary Structure SELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKSFLKDNVELLESDPFKA CCHHCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH ILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYLIQRLKGVKPTAKVEFELN HHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE TLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQGILELNEFIQSKESKTEFLQT HEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHC PLPFIAKIKQLEFFKGGASEESDEALRERAVMSVHRFSTAGSEKGYIYHALSASAKVASI CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHH KALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRPLTDEVSVELAKKREFIVDAKLLLL EEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELSRANEISEKINALQKDFDLSVDLALGFIYKCLHQDGVYKSEILSIKEKIINEEEQELK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH DLPLANIIIADDEFATLSFSLSYEKAVL HCCCEEEEEECCCEEEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA