| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237242
Identifier: 57237242
GI number: 57237242
Start: 217552
End: 218631
Strand: Reverse
Name: 57237242
Synonym: CJE0231
Alternate gene names: NA
Gene position: 218631-217552 (Counterclockwise)
Preceding gene: 57237243
Following gene: 57237241
Centisome position: 12.3
GC content: 30.0
Gene sequence:
>1080_bases ATGGCAAAAAGTGAATACTATACCATACTAACAAAAATTGGCATTGCTAAATTTATTGCTGCAAGAGCAAGTGGAAATGG TATCAATTTAAAAAGCTTTAAATTAAGTTCAAAAGTTATTTTGCCCAGTGAAGAAATGCAAAGCTTAGAAGAGATTGTAT ATGAAGCTAATATTAGTAGCAAAAGCGTGGATGAAAGCAATCCAAACTATGTGAATTTAATGTGTCATGTGCCAAGCGAT GTGGGCGGGTTTGAAGTTAATGCAGTAGGCATTTATGATGAAGCAGGAGATTTGCTTGCAGTTGGAAATGTCCCACGCAC TTATAAACCTATCTTAAAAGAAGGCAGTGCTAAAGAGCTTATGATAAAAATTGTCATGGAGCTTTCTAATGCAGAGGAAG TTATTTTAAAACTAGATCCTAGTGTGATTATGGCAAGTCGTGATTATGTGGATGTTATTAAAGTGGAACTCAATCTTAAA ATTGATGCTTTAACGCAAAAATATGATGCAGAGTTTAAAAAAGTATGGGATGAGTTTGCTAAATATCTTTTAGAAAATAA ATTTAATACAGAAATTGCCAAATATGTTACTTTAGCTACTAATCAAACCATTACAGGAGCCAAAGACTTTACCAAACTAC CTACAAGCTCTATAAAAGCTACAAATGACAATCAATTTGTAAATTTAGCTACCTTAAAAGAAAATCAACTCAATTTAAAA GATCCAGAACTTTTAGCATTGATAGGGTTTAATACCTATCTTGATGGAACTTCTTTACTTAAATCTCATTCTATGTCTAA TAATGTGATATACACAAATACAACAGGAGGAAAAACACCTATTGCAATAAAAATTCAACAAATCGATAATGTAGTCAATC AAGCTAGTATTAGTATATACATAAATAATTCTTTAATAAAAAAAATAAATGCTATACAATACACTAATTCAACAGGTAAA TATATTCCATTAACACATTATGAAGGTATTTTGAAACCAAATGACACATATAAAATAGAATTGTTTAATATTGTTATGGA TAAGCCAAATATTGAGGCAACAATTTTAAATGTCCAATAA
Upstream 100 bases:
>100_bases CCACTTTTTTAGAAAATGAAATTAAAAGTACTAAAAATGTATTTGGAATTTTTATGTGTGAAATAACAAGAACTAATATT GATTTTAAAGGAGTGTATTA
Downstream 100 bases:
>100_bases GGAGAAAAAATGAAATATTTTATAGACAAAAACGATAATAATCAAATTTATGCTTATGAGGATGAAGTGAGCGATGAGCA AATTAAAACAGGTTTAACAC
Product: tail fiber protein H
Products: NA
Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Tail Fiber-Related Protein; Variable Tail Fibre Protein; Phage Tail Collar Domain-Containing Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Variable Tail Fiber Protein; Tail Fiber Domain Protein; Tail Fiber Domain-Containing Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Side Tail Phage Protein; Phage Variable Tail Fiber Protein; Phage Tail Fiber Domain Protein; Phage-Related Tail Fiber Protein-Like Protein; Tail Fiber Repeat 2 Protein; Phage Tail Fiber-Like Protein; Phage-Like Tail Fiber-Like Protein; Phage Tail-Like Protein; Phage Tail Collar; E14 Prophage; Bacteriophage Variable Tail Fibre Protein; Prophage Tail Fiber Protein; Phage Protein GpH; Phage-Like Tail Fibre Protein; Tail Fiber Repeat 2-Containing Protein; Tail Fiber Protein GpH
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSD VGGFEVNAVGIYDEAGDLLAVGNVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDVIKVELNLK IDALTQKYDAEFKKVWDEFAKYLLENKFNTEIAKYVTLATNQTITGAKDFTKLPTSSIKATNDNQFVNLATLKENQLNLK DPELLALIGFNTYLDGTSLLKSHSMSNNVIYTNTTGGKTPIAIKIQQIDNVVNQASISIYINNSLIKKINAIQYTNSTGK YIPLTHYEGILKPNDTYKIELFNIVMDKPNIEATILNVQ
Sequences:
>Translated_359_residues MAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSD VGGFEVNAVGIYDEAGDLLAVGNVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDVIKVELNLK IDALTQKYDAEFKKVWDEFAKYLLENKFNTEIAKYVTLATNQTITGAKDFTKLPTSSIKATNDNQFVNLATLKENQLNLK DPELLALIGFNTYLDGTSLLKSHSMSNNVIYTNTTGGKTPIAIKIQQIDNVVNQASISIYINNSLIKKINAIQYTNSTGK YIPLTHYEGILKPNDTYKIELFNIVMDKPNIEATILNVQ >Mature_358_residues AKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSDV GGFEVNAVGIYDEAGDLLAVGNVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDVIKVELNLKI DALTQKYDAEFKKVWDEFAKYLLENKFNTEIAKYVTLATNQTITGAKDFTKLPTSSIKATNDNQFVNLATLKENQLNLKD PELLALIGFNTYLDGTSLLKSHSMSNNVIYTNTTGGKTPIAIKIQQIDNVVNQASISIYINNSLIKKINAIQYTNSTGKY IPLTHYEGILKPNDTYKIELFNIVMDKPNIEATILNVQ
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39901; Mature: 39770
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISS CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCHHHHHHHHHHHHHCCCCC KSVDESNPNYVNLMCHVPSDVGGFEVNAVGIYDEAGDLLAVGNVPRTYKPILKEGSAKEL CCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHCCCCHHHH MIKIVMELSNAEEVILKLDPSVIMASRDYVDVIKVELNLKIDALTQKYDAEFKKVWDEFA HHHHHHHHCCCCEEEEEECCCEEEECCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH KYLLENKFNTEIAKYVTLATNQTITGAKDFTKLPTSSIKATNDNQFVNLATLKENQLNLK HHHHCCCCCCCCEEEEEEECCCEECCCHHHHCCCCCCEEECCCCCEEEEEEEECCCCCCC DPELLALIGFNTYLDGTSLLKSHSMSNNVIYTNTTGGKTPIAIKIQQIDNVVNQASISIY CCCEEEEEECCHHCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHHHHCCEEEEEE INNSLIKKINAIQYTNSTGKYIPLTHYEGILKPNDTYKIELFNIVMDKPNIEATILNVQ ECCHHHHHHHEEEEECCCCCEEEECCCCCEECCCCCEEEEEEEEEECCCCCEEEEEEEC >Mature Secondary Structure AKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSEEMQSLEEIVYEANISS CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCHHHHHHHHHHHHHCCCCC KSVDESNPNYVNLMCHVPSDVGGFEVNAVGIYDEAGDLLAVGNVPRTYKPILKEGSAKEL CCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHCCCCHHHH MIKIVMELSNAEEVILKLDPSVIMASRDYVDVIKVELNLKIDALTQKYDAEFKKVWDEFA HHHHHHHHCCCCEEEEEECCCEEEECCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHH KYLLENKFNTEIAKYVTLATNQTITGAKDFTKLPTSSIKATNDNQFVNLATLKENQLNLK HHHHCCCCCCCCEEEEEEECCCEECCCHHHHCCCCCCEEECCCCCEEEEEEEECCCCCCC DPELLALIGFNTYLDGTSLLKSHSMSNNVIYTNTTGGKTPIAIKIQQIDNVVNQASISIY CCCEEEEEECCHHCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEHHHHHHHCCEEEEEE INNSLIKKINAIQYTNSTGKYIPLTHYEGILKPNDTYKIELFNIVMDKPNIEATILNVQ ECCHHHHHHHEEEEECCCCCEEEECCCCCEECCCCCEEEEEEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA