| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237238
Identifier: 57237238
GI number: 57237238
Start: 214351
End: 215544
Strand: Reverse
Name: 57237238
Synonym: CJE0227
Alternate gene names: NA
Gene position: 215544-214351 (Counterclockwise)
Preceding gene: 57237239
Following gene: 57237237
Centisome position: 12.12
GC content: 34.34
Gene sequence:
>1194_bases ATGGCAGCAAATTATGGAGTTAATTTTAATATTAGCAATGGTGCGGCAAGTCCTATTAAAGTGCAAAGTGATACGCCTAT AGGTATTGCTGGGGCTATAAAAGGTGCAAGTAAAGAAATGATTTACACAAAGGCTGGTTATGAAAGCGTGGATAGCTTTC CAATCTTTGCCTTTTCAAATGTAAGCAAAGCAAAAGAATTTGTAAACGATTTAATCAAAGAAAATAACTTACAAGATTTT AGACTTTTAGATACTTTAGAATGTATCAATCTACAAAATGTTTCTAATGTCATAATTATCAGCTTTTTTGAAGAAAGCGA GGAAAGTGAAAACACTTTAACCAATATTGTTAATGCCATAGAAGCTTTTAAAAAAGCAAAGCACAAAACAGGCTTTAACC CTGATTTAATCATTGCTCCTTATTACTCACATGAAGCAGGAGTAAAGGCTAAGCTTGAAAGTGTGGCAAGTTCTATGAAT ATCACAGCTATTGTGGATCTTTACGCTACAAATGTTGGCGAAGCTATTAATACAATGGAGGCTTTTAGCTCTAAAAGATT AATTGCTGCTTGGCCACAGGTTCAAATCTTAAATACACAAGGAAAATACGCTTATGTTCCACAATCTCCTATCATCGCAG GTTTAATAGCTCATACAGATGGAGATAAAGAATATGGCTTTAGTGATTCTTACTCAAATAGAGTGATGAATGGGGTTACT GGCACAGAGTATTTTATAGAGTTTATCAATGGCTTTGATTGTGATGCAGAAAGACTAAGAAACGCTCATATTTCAACTTG TATTTTAAGTGAAGGTTATCGCTCTTGGGGTGGGGAAACTAGCCATGAAGATACGATTTGGCAAGATTTAGCTCGTGTAA GAACCTTTGATCGCATAGCTCTAGCAGGACAAAAAGCAGCTTTTAAGGCTATTGATAAAAAAGCAAGTGAATTATATTTT ATAAAAATCAGCATTGAAGAATTGCTAAGAGATTTAAAAGGAGCTAAGGTTTTAATTGGCTATGAGGTAAGCTGGGATGA AGAAAGAAACACAGATGCCAATGTGAGTGCTGGTAAGTTTTATCTAAATATAAAAATGATGAATAATCCAATCGTTAAAC AAATCACTTTAGAGTTCATCTACTCTGATGAATGGGCGAGTGATTTGATTAAAACTATTAGTGCGGATAGTTAA
Upstream 100 bases:
>100_bases GAAATTTCTAAACAAGATCAAATTGTTATGAAAAAAGAGCTTAATTTAAATCCTAAAAAAACAAAAAATACAAAAAATGT AAAGAAATAAGGAGTGAATA
Downstream 100 bases:
>100_bases TAAATTTTTACAAGGAGAAAATAAAAATGAAAAGAATAATTGGCGAAGTTATACAGGAAGGTAATATTTATATAGATGGA CAAGGTTATCTTGGAGTGGT
Product: major tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MAANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTKAGYESVDSFPIFAFSNVSKAKEFVNDLIKENNLQDF RLLDTLECINLQNVSNVIIISFFEESEESENTLTNIVNAIEAFKKAKHKTGFNPDLIIAPYYSHEAGVKAKLESVASSMN ITAIVDLYATNVGEAINTMEAFSSKRLIAAWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVT GTEYFIEFINGFDCDAERLRNAHISTCILSEGYRSWGGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYF IKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDEWASDLIKTISADS
Sequences:
>Translated_397_residues MAANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTKAGYESVDSFPIFAFSNVSKAKEFVNDLIKENNLQDF RLLDTLECINLQNVSNVIIISFFEESEESENTLTNIVNAIEAFKKAKHKTGFNPDLIIAPYYSHEAGVKAKLESVASSMN ITAIVDLYATNVGEAINTMEAFSSKRLIAAWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVT GTEYFIEFINGFDCDAERLRNAHISTCILSEGYRSWGGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYF IKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDEWASDLIKTISADS >Mature_396_residues AANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTKAGYESVDSFPIFAFSNVSKAKEFVNDLIKENNLQDFR LLDTLECINLQNVSNVIIISFFEESEESENTLTNIVNAIEAFKKAKHKTGFNPDLIIAPYYSHEAGVKAKLESVASSMNI TAIVDLYATNVGEAINTMEAFSSKRLIAAWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVTG TEYFIEFINGFDCDAERLRNAHISTCILSEGYRSWGGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYFI KISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDEWASDLIKTISADS
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44040; Mature: 43909
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTKAGYESVDSFPIFAFSN CCCCCCEEEEECCCCCCCEEECCCCCCEEEHHCCCCCCCEEEEECCCCCCCCCCEEEECC VSKAKEFVNDLIKENNLQDFRLLDTLECINLQNVSNVIIISFFEESEESENTLTNIVNAI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EAFKKAKHKTGFNPDLIIAPYYSHEAGVKAKLESVASSMNITAIVDLYATNVGEAINTME HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH AFSSKRLIAAWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVT HHCCCCEEEECCCEEEEECCCCEEECCCCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCC GTEYFIEFINGFDCDAERLRNAHISTCILSEGYRSWGGETSHEDTIWQDLARVRTFDRIA HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LAGQKAAFKAIDKKASELYFIKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKF HCCCHHHHHHHHCCCCEEEEEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEE YLNIKMMNNPIVKQITLEFIYSDEWASDLIKTISADS EEEEEECCCCCHHHEEEEEEECCHHHHHHHHHHCCCC >Mature Secondary Structure AANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTKAGYESVDSFPIFAFSN CCCCCEEEEECCCCCCCEEECCCCCCEEEHHCCCCCCCEEEEECCCCCCCCCCEEEECC VSKAKEFVNDLIKENNLQDFRLLDTLECINLQNVSNVIIISFFEESEESENTLTNIVNAI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EAFKKAKHKTGFNPDLIIAPYYSHEAGVKAKLESVASSMNITAIVDLYATNVGEAINTME HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH AFSSKRLIAAWPQVQILNTQGKYAYVPQSPIIAGLIAHTDGDKEYGFSDSYSNRVMNGVT HHCCCCEEEECCCEEEEECCCCEEECCCCCHHEEEEEECCCCCCCCCCCCHHHHHHCCCC GTEYFIEFINGFDCDAERLRNAHISTCILSEGYRSWGGETSHEDTIWQDLARVRTFDRIA HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LAGQKAAFKAIDKKASELYFIKISIEELLRDLKGAKVLIGYEVSWDEERNTDANVSAGKF HCCCHHHHHHHHCCCCEEEEEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEE YLNIKMMNNPIVKQITLEFIYSDEWASDLIKTISADS EEEEEECCCCCHHHEEEEEEECCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA