| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is dam [H]
Identifier: 57237231
GI number: 57237231
Start: 209239
End: 210054
Strand: Reverse
Name: dam [H]
Synonym: CJE0220
Alternate gene names: 57237231
Gene position: 210054-209239 (Counterclockwise)
Preceding gene: 57237232
Following gene: 57237229
Centisome position: 11.82
GC content: 27.33
Gene sequence:
>816_bases ATGAAAAATAATACAGACAAATTTCTAAAAACTAGCACACTTACTAAACCTACAAGAACTACACTAAAAGCTCCATTTGC TTGGGTGGGTGGTAAAAACTATTTAGCTAAAGAAATCATTGCTTTAATGCCTGAGCATAAAAGCTATATTGAAGTCTTTG GAGGAGCTTTAAGTGTTTTTTATCAAAAAAGTGCTTCAAAAATAGAAGTCATTAACGACATTAACGACGAGCTTATTAAT TTACATCTTTGTATAAGAAACAAACCCCAAAGCCTAGCAAATGTGCTTAATTCTATGATAATAAGTAGAAAAATCTTTCA TATGCTTAAAAATAAAGAAATTAAACCAAGAAATGACTTAGAAAGGGCTGCTTTTTATTTTTATCTTATCAGTACTTCTT TTGGTTCAAGCATGGGACAATTTGCTATGAATAAACAAAGAGCACCAAAGAGATTATGTAGGGATTTTAGCTTACATACA AAAAGACTTAAAAATGCCAGTATTGAAAATAAAAGCTTTGAATATATTTTAAAAGAATATGATTACAATGAAGCTTTATT TTATTTAGATCCACCTTATGTAGGAACTGAGAATTATTATAAAAACACAGGAGGTTTTGGGCTAAAAGAACATGAACTTT TATGTAATTTGCTTAAAAATATCAAGGGTAAATTTATGCTTTCTTATAATGATTGTGAGCTTATAAGAAAGCTTTATAAA GATTTTAATTTTAAGGAGTTGAAAGTAAGGTATTCTTTAAATAATAATGTTTTAAAAAGAAAAGAAAGTAAAGAGCTTTT GATTATGAATTTTTAA
Upstream 100 bases:
>100_bases AAGGAAGACTAAAGCCTTCCTTTTTCTAAAAACTAGCAAAAGCATTATAGCTTTGTTTTTAAAGCAAAGCTTTTTTAATT TTATTTTGAAAGGAGTTTGT
Downstream 100 bases:
>100_bases AAGCTAAGAGAGTAAAAATACTCTCTTTTATTTTAGCAAAGAGCTTAAAAACTTTAGAGCTTCTTTGCTAAAATCTTTAT TGCATTCTTCTAGGTAATTT
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.MboIA; Adenine-specific methyltransferase MboIA [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVFYQKSASKIEVINDINDELIN LHLCIRNKPQSLANVLNSMIISRKIFHMLKNKEIKPRNDLERAAFYFYLISTSFGSSMGQFAMNKQRAPKRLCRDFSLHT KRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRKLYK DFNFKELKVRYSLNNNVLKRKESKELLIMNF
Sequences:
>Translated_271_residues MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVFYQKSASKIEVINDINDELIN LHLCIRNKPQSLANVLNSMIISRKIFHMLKNKEIKPRNDLERAAFYFYLISTSFGSSMGQFAMNKQRAPKRLCRDFSLHT KRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRKLYK DFNFKELKVRYSLNNNVLKRKESKELLIMNF >Mature_271_residues MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVFYQKSASKIEVINDINDELIN LHLCIRNKPQSLANVLNSMIISRKIFHMLKNKEIKPRNDLERAAFYFYLISTSFGSSMGQFAMNKQRAPKRLCRDFSLHT KRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRKLYK DFNFKELKVRYSLNNNVLKRKESKELLIMNF
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MboI endonuclease [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=260, Percent_Identity=23.4615384615385, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 31703; Mature: 31703
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVF CCCCHHHHHHHHCCCCCCHHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH YQKSASKIEVINDINDELINLHLCIRNKPQSLANVLNSMIISRKIFHMLKNKEIKPRNDL HHHCCCHHHHHHHCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ERAAFYFYLISTSFGSSMGQFAMNKQRAPKRLCRDFSLHTKRLKNASIENKSFEYILKEY HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC DYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRKLYK CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH DFNFKELKVRYSLNNNVLKRKESKELLIMNF CCCCEEEEEEEECCCCHHHCCCCCCEEEEEC >Mature Secondary Structure MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMPEHKSYIEVFGGALSVF CCCCHHHHHHHHCCCCCCHHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH YQKSASKIEVINDINDELINLHLCIRNKPQSLANVLNSMIISRKIFHMLKNKEIKPRNDL HHHCCCHHHHHHHCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ERAAFYFYLISTSFGSSMGQFAMNKQRAPKRLCRDFSLHTKRLKNASIENKSFEYILKEY HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC DYNEALFYLDPPYVGTENYYKNTGGFGLKEHELLCNLLKNIKGKFMLSYNDCELIRKLYK CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH DFNFKELKVRYSLNNNVLKRKESKELLIMNF CCCCEEEEEEEECCCCHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8506128 [H]