| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237226
Identifier: 57237226
GI number: 57237226
Start: 207610
End: 208239
Strand: Direct
Name: 57237226
Synonym: CJE0215
Alternate gene names: NA
Gene position: 207610-208239 (Clockwise)
Preceding gene: 57237225
Following gene: 57237227
Centisome position: 11.68
GC content: 27.94
Gene sequence:
>630_bases ATGCAAATGCAAGAAGTGATTGAAAAGTTAAAGGATATACTTGCGAGTGAAGGCAAAAGAGATTTAAAAACAAAAGATAT AGCCAAAGAATTAGGAATCAATCCTGATACTTTTAATTCCATGAAATTTAGAAACTCCATTCCTTATCCACAAATCTTAA ACTTTTTAAATGAGAGGAATATAAGCATTAATTATTTTTTCTATGGTGTCTCTCCTAAAGATCAATTAGAATGTGAGAAT AAATATAAAATTTTAAAGCTTTATAAAACAAATGCGAGTTTAGGCGGAGGCGGAATAAATGATTTAATAGATTGCTCTGA GCTTATTGTAGATGAAAAATTATTAAACTTTTTTGGTAGTAAAGAGTGTGAGTTTATCACTTGCTATGGAGAAAGCATGG AGCCACTTATAAAAGATGGAAGTATTTGTGTAATAGATAGAAATAAGGCTTTTAAGAATAAAAGCATTTGTGTGATTAAT ACTAGAGATGGACTTTTTATAAAACAAGTTTTAAAACAAGATGATGGAGTGATTTTACACTCTTTAAATCCTTTATATGA AGATATATTTTATAAAAATGGAGATTTTTTGCTAATTGGTGTAGTAATTGGAGAACTTTCTAAGATGTAA
Upstream 100 bases:
>100_bases TTCAAGCTCTTATATTAAAAATCTTTCAAATCAAAAGTTTTTAATTGCTTTTTGAAATTTTATGTTTAAATTCTTTGAAG TTAAAATCAAAGGATTTAAA
Downstream 100 bases:
>100_bases CAGTACACAATAAGCTAAGTCAAGCTAATCTCACAGAGAGTGTAAAACACAAGGTTGTTCTATCAAAAAAGGAGATAAAC ATGAAAGATATCAAAAATTA
Product: phage repressor protein
Products: NA
Alternate protein names: S24 Family Peptidase; Signal Peptidase I; Peptidase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFRNSIPYPQILNFLNERNISINYFFYGVSPKDQLECEN KYKILKLYKTNASLGGGGINDLIDCSELIVDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKAFKNKSICVIN TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSKM
Sequences:
>Translated_209_residues MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFRNSIPYPQILNFLNERNISINYFFYGVSPKDQLECEN KYKILKLYKTNASLGGGGINDLIDCSELIVDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKAFKNKSICVIN TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSKM >Mature_209_residues MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFRNSIPYPQILNFLNERNISINYFFYGVSPKDQLECEN KYKILKLYKTNASLGGGGINDLIDCSELIVDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKAFKNKSICVIN TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSKM
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23818; Mature: 23818
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFRNSIPYPQILNFLNERN CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHCCC ISINYFFYGVSPKDQLECENKYKILKLYKTNASLGGGGINDLIDCSELIVDEKLLNFFGS CEEEEEEEECCCCHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC KECEFITCYGESMEPLIKDGSICVIDRNKAFKNKSICVINTRDGLFIKQVLKQDDGVILH CCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEE SLNPLYEDIFYKNGDFLLIGVVIGELSKM CCCHHHHHHHCCCCCEEEEHHHHHHHHCC >Mature Secondary Structure MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFRNSIPYPQILNFLNERN CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHCCC ISINYFFYGVSPKDQLECENKYKILKLYKTNASLGGGGINDLIDCSELIVDEKLLNFFGS CEEEEEEEECCCCHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC KECEFITCYGESMEPLIKDGSICVIDRNKAFKNKSICVINTRDGLFIKQVLKQDDGVILH CCCCEEEEECCCCCHHHCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEE SLNPLYEDIFYKNGDFLLIGVVIGELSKM CCCHHHHHHHCCCCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA