| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237126
Identifier: 57237126
GI number: 57237126
Start: 122133
End: 122654
Strand: Direct
Name: 57237126
Synonym: CJE0114
Alternate gene names: NA
Gene position: 122133-122654 (Clockwise)
Preceding gene: 57237125
Following gene: 57237127
Centisome position: 6.87
GC content: 27.39
Gene sequence:
>522_bases ATGAAAAAAGCTTTTGTTTTAGTGGATTATCAAAATGATTTTATTGATGGAAGTTTAGGTTTTGATAAGGCTTTAAAAAT CAAAGAAAATATTCTTAAAGCCTTAAATCAAATCGATTTTAATAACACGCATTTGCTTTTAACCTATGATACGCATGATG AGCATTATCTACAAAGTAAAGAAGGTTTAAATTTACCTGTAAAACATTGCATTAAAGAGAGTTTGGGTTGGCAAATGCCA AAGGAATTTGAACCTTTTTTACAAAAAGCTCATAAAATTTTTTATAAAAATACTTTTGGTAGCTTAGAATTAGCTAATTT CATACAAAAAAGTGATTATGAAGAACTTCATTTTGCAGGGCTTGTTTCTCATATTTGTGTGTTTTGTAATATTATTTTAG CTTTTGGTGCTAAGCCTAATGCAAGGATAATTTTACACCAAAATTTAAGTGCAAGTTTTGATGAAAATTTAGAAAAATCC GCTTTTGATATACTTAGGGCTTATGGTATTGAAATTGTTTAA
Upstream 100 bases:
>100_bases GCAAATTTAGAAAAAGATCATCCTAAGCTTTTTACAAGCTTAAAAACTGCTTTTACAAATTTACACACAGAAAGTTTTTG GCTTCAAAAGGCATAAAAGC
Downstream 100 bases:
>100_bases TGCAAGGCTTTATACTTCATACTCAAAAAGTTAAAGATGAGGATTTGATTGTTTATATTTTAAGTCCTAAAATGCTTATT AAGGCTTATCGTTTTTATGG
Product: pyrazinamidase/nicotinamidase
Products: NA
Alternate protein names: Isochorismatase Hydrolase; Pyrazinamidase/Nicotinamidase; Isochorismatase Family Protein; Pyrazinamidase; Cysteine Hydrolase Isochorismatse Family
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHLLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMP KEFEPFLQKAHKIFYKNTFGSLELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS AFDILRAYGIEIV
Sequences:
>Translated_173_residues MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHLLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMP KEFEPFLQKAHKIFYKNTFGSLELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS AFDILRAYGIEIV >Mature_173_residues MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHLLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMP KEFEPFLQKAHKIFYKNTFGSLELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS AFDILRAYGIEIV
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19910; Mature: 19910
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHLLLTYDTHDEHYLQSK CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCC EGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSLELANFIQKSDYEELHFAG CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH LVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKSAFDILRAYGIEIV HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHLLLTYDTHDEHYLQSK CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCC EGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSLELANFIQKSDYEELHFAG CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH LVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKSAFDILRAYGIEIV HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA