| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237059
Identifier: 57237059
GI number: 57237059
Start: 64687
End: 65451
Strand: Reverse
Name: 57237059
Synonym: CJE0044
Alternate gene names: NA
Gene position: 65451-64687 (Counterclockwise)
Preceding gene: 57237061
Following gene: 57237058
Centisome position: 3.68
GC content: 27.58
Gene sequence:
>765_bases ATGAAAGTTAAATGGAGTAGAGATTTTAGCATTAAAAATATGCAATTAGACAAACAACACGAACTAATTTTTGAAATTAC CAATCTTGCAAATGATTTAGCTCTAAACATTCAAGATAATAATACACAACACAAAAATGATTTAAAACAAATTCTTGTAA AGCTATTTCAATACATCAAAATTCATTTTAAAGATGAAGAAAAATTTATGGAAAGCATTGATTTTCCTTTAATTGAAGAA CATAAAAAATCTCATCAAATATTAGTAGAAAAAACTAAAGAGCTTTTAGAACACTCAAATGATATTGTAAAAATGTCTCA AGAACTTTCCATATTAACCAAAGATTGGATTTTAGATCATTTTGCTAATGAAGATTTATGGATAGCTAATTTTACAAAAA AAACCCTACACCTTCAAGAAATCCATTATACCTTAGAACAATACATAAAACTAAAATCAATCAAACAAGACCTAAGAGCT GAAAAAACTCATGATTATATTTGCAATTGTTCTTTGCGTATCCATGCAGTTCCACAGACTATACATCAAGAGCTTGTTAG CAAAGAAAATACCTTAAAGTGCGAAAAATGTGGGCAAATTTTAGTTCATTTGGATTATTTTGATTTGAATCAAAATTTCG AAAAATTCAATGCTATTTTTGAAGATGCACTACAAAATCACCATTTCACGACTCAAAAAAATGATATGGGGGGGGGGATA GATGAATTTTCAAGTAAAAACCTTAGAAACTTTCAATCCTTTTGA
Upstream 100 bases:
>100_bases GTTAAAAATTTTATACATTTTTTAAAATTTATTTATAAAAACTATTATTTTATTCTCTAAAAATACGATATAAAAATAAT TTATATCGCAAGGAAAAAAT
Downstream 100 bases:
>100_bases AAGTTTAAATCATGAACAAGCAAACACAGAACAAATTCTTGATTTTAGAGTTATAGATTTTAAACTTCTGTGTTCTAGTG TAAAACCAGCAAAAACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Hemerythrin Family Non-Heme Iron Protein; Non-Heme Iron Protein Hemerythrin Family; Hemerythrin
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI DEFSSKNLRNFQSF
Sequences:
>Translated_254_residues MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI DEFSSKNLRNFQSF >Mature_254_residues MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI DEFSSKNLRNFQSF
Specific function: Unknown
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30259; Mature: 30259
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00550 HEMERYTHRINS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDH HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQT HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECHHH IHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI HHHHHHCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH DEFSSKNLRNFQSF HHHCCCCHHHHCCC >Mature Secondary Structure MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH IHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDH HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQT HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECHHH IHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI HHHHHHCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH DEFSSKNLRNFQSF HHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA