Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57237059

Identifier: 57237059

GI number: 57237059

Start: 64687

End: 65451

Strand: Reverse

Name: 57237059

Synonym: CJE0044

Alternate gene names: NA

Gene position: 65451-64687 (Counterclockwise)

Preceding gene: 57237061

Following gene: 57237058

Centisome position: 3.68

GC content: 27.58

Gene sequence:

>765_bases
ATGAAAGTTAAATGGAGTAGAGATTTTAGCATTAAAAATATGCAATTAGACAAACAACACGAACTAATTTTTGAAATTAC
CAATCTTGCAAATGATTTAGCTCTAAACATTCAAGATAATAATACACAACACAAAAATGATTTAAAACAAATTCTTGTAA
AGCTATTTCAATACATCAAAATTCATTTTAAAGATGAAGAAAAATTTATGGAAAGCATTGATTTTCCTTTAATTGAAGAA
CATAAAAAATCTCATCAAATATTAGTAGAAAAAACTAAAGAGCTTTTAGAACACTCAAATGATATTGTAAAAATGTCTCA
AGAACTTTCCATATTAACCAAAGATTGGATTTTAGATCATTTTGCTAATGAAGATTTATGGATAGCTAATTTTACAAAAA
AAACCCTACACCTTCAAGAAATCCATTATACCTTAGAACAATACATAAAACTAAAATCAATCAAACAAGACCTAAGAGCT
GAAAAAACTCATGATTATATTTGCAATTGTTCTTTGCGTATCCATGCAGTTCCACAGACTATACATCAAGAGCTTGTTAG
CAAAGAAAATACCTTAAAGTGCGAAAAATGTGGGCAAATTTTAGTTCATTTGGATTATTTTGATTTGAATCAAAATTTCG
AAAAATTCAATGCTATTTTTGAAGATGCACTACAAAATCACCATTTCACGACTCAAAAAAATGATATGGGGGGGGGGATA
GATGAATTTTCAAGTAAAAACCTTAGAAACTTTCAATCCTTTTGA

Upstream 100 bases:

>100_bases
GTTAAAAATTTTATACATTTTTTAAAATTTATTTATAAAAACTATTATTTTATTCTCTAAAAATACGATATAAAAATAAT
TTATATCGCAAGGAAAAAAT

Downstream 100 bases:

>100_bases
AAGTTTAAATCATGAACAAGCAAACACAGAACAAATTCTTGATTTTAGAGTTATAGATTTTAAACTTCTGTGTTCTAGTG
TAAAACCAGCAAAAACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Hemerythrin Family Non-Heme Iron Protein; Non-Heme Iron Protein Hemerythrin Family; Hemerythrin

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE
HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI
DEFSSKNLRNFQSF

Sequences:

>Translated_254_residues
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE
HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI
DEFSSKNLRNFQSF
>Mature_254_residues
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEE
HKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI
DEFSSKNLRNFQSF

Specific function: Unknown

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30259; Mature: 30259

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
IHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDH
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQT
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECHHH
IHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI
HHHHHHCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
DEFSSKNLRNFQSF
HHHCCCCHHHHCCC
>Mature Secondary Structure
MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
IHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDH
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVPQT
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECHHH
IHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDMGGGI
HHHHHHCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
DEFSSKNLRNFQSF
HHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA