| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237045
Identifier: 57237045
GI number: 57237045
Start: 43241
End: 44638
Strand: Direct
Name: 57237045
Synonym: CJE0030
Alternate gene names: NA
Gene position: 43241-44638 (Clockwise)
Preceding gene: 57236941
Following gene: 57237046
Centisome position: 2.43
GC content: 20.67
Gene sequence:
>1398_bases ATGGAAAAATTTATTGAAAGGTTGCTTGAAGAAGATATTAAATTTGAAAAAGATGTGAATAATGGTTTGAGTGATATAAA TATATTTGATGCTTTGAATATTGAAACAAAAGAAAATTATCATTCTAAATTTATAGCTTATTTAATTGATATAAATAAGG ATCATTATCAAAAAAATTTTGCAAAGGTATTTTTAGAAAAACTTGGTAAGAGTTTAGTAAATACGAAATTTGAAAATTTA AACATAGAAGATATAAAAAGCGTAGAAACAGAAGCCTGCATAAAAGATAATAGAAGGATAGATATTTTAATAACATTAAG TGATAAAAGATATATTATAATAGAAAATAAAATTTATGCAAAAGATCAAAAAAATCAATTGAAAGATTATATTAATTTTG TAAGAAAAAATATCAAAAATATAAAAGATTGTTATAAAAACATATTGACTATATATTTGCATCAAGATGAGTGTGCTAGT CCTAGTGATTATAGTTTGGGAAATTTTACAATAAAGACAAATTTGATTAAAGATAAAAATGAAAATAATGTTAGCTATTA TTTGAAGATGGATTATATATGGATTAAGGAATGGATTGATGAGTGTATAAAAATATATGAAGAAAAATCAACCAAAGATC AAAAATTTATTCTTGATATACAAAACATTATTTTTACTCTAAATCAATACAAAAGTATTTTACAATGGTATATGACAGAT GAGTATACTCAAAGAGATGATGTACTAGAATTTATTTTTCAAAACAATATAAAAATGCAAAATTTAAAAAATGCGATGAT TTTATATAGATATAACAAAAACAAATCAGAGCTTAAAAATTTAAATGAAGAAAACTATAAGAAAGCTAAAGATATTATCC AGCATAAATGGAGTAACATCTGCGAATATATAATAGAAGAATTTTTTGATAGTTTTGAACACAAGGAAATTAAAATAGGT GATATAACTTTTATCGGCAATAAAATAGAAGAAAATCGTGTTAATCATGGTGTGTTTATATTTTATCCTATTGATTATAA GAATGAAAGCATATATCCATGTATATATATTTATTTTAAAAAAAAATACTATGATATTATTGGTTTGACATTTGAAATTT CAAATGATGATGAAGAAGATATAGAAAATGAAAAATATAAAGAATGTTTAAAATTATTTAAAGATGTAAAAGAAGAAAAT GTTAGAAAATATCAAAATCACTATTATTGTGATAAATTAATAAACAATGAAAAATTAGAAGGAGAATACGCTTTTATTTA TTGGTTGATTGAAAATCAAAATTCTAAAAAAGATTTTATTCAAATTTTAAATGATTTTTTTATTAAAAAACCTATACAGG AAGCATATAAAGGTATTAATGATATATTAAATTCTTAA
Upstream 100 bases:
>100_bases ATTCTACTTAACTTGCCTATAAAATTAATAATCAGTTTTTTTAGTTTGTAATTAAAAATTTATTTACATGTAAAATTGTA TAAAATTTGGAAAGTGATAC
Downstream 100 bases:
>100_bases AAAATTTTATATAAAAGTAAAATTTGATAAAATACAAAATATTTTTTATAAAGGTTAAAAATGCATTTCACTTTGCTAAA TGAAAAAGATTTTTTCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENL NIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECAS PSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTD EYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIG DITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFKKKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEEN VRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS
Sequences:
>Translated_465_residues MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENL NIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECAS PSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTD EYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIG DITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFKKKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEEN VRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS >Mature_465_residues MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENL NIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECAS PSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTD EYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIG DITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFKKKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEEN VRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56372; Mature: 56372
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNF CHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHEEEHEEECCHHHHHHHH AKVFLEKLGKSLVNTKFENLNIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYA HHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCEEC KDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECASPSDYSLGNFTIKTNLIKDKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC ENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTD CCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNI CCCCHHHHHHHHHHCCCCHHCCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHH CEYIIEEFFDSFEHKEIKIGDITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFK HHHHHHHHHHCCCCCEEEEEEEEEECCCHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEE KKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEENVRKYQNHYYCDKLINNEKLE HHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS CCEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKFIAYLIDINKDHYQKNF CHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHEEEHEEECCHHHHHHHH AKVFLEKLGKSLVNTKFENLNIEDIKSVETEACIKDNRRIDILITLSDKRYIIIENKIYA HHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCEEC KDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECASPSDYSLGNFTIKTNLIKDKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC ENNVSYYLKMDYIWIKEWIDECIKIYEEKSTKDQKFILDIQNIIFTLNQYKSILQWYMTD CCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKSELKNLNEENYKKAKDIIQHKWSNI CCCCHHHHHHHHHHCCCCHHCCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHH CEYIIEEFFDSFEHKEIKIGDITFIGNKIEENRVNHGVFIFYPIDYKNESIYPCIYIYFK HHHHHHHHHHCCCCCEEEEEEEEEECCCHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEE KKYYDIIGLTFEISNDDEEDIENEKYKECLKLFKDVKEENVRKYQNHYYCDKLINNEKLE HHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEYAFIYWLIENQNSKKDFIQILNDFFIKKPIQEAYKGINDILNS CCEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA