| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57236988
Identifier: 57236988
GI number: 57236988
Start: 717195
End: 718592
Strand: Reverse
Name: 57236988
Synonym: CJE0783
Alternate gene names: NA
Gene position: 718592-717195 (Counterclockwise)
Preceding gene: 57236990
Following gene: 57236983
Centisome position: 40.42
GC content: 25.46
Gene sequence:
>1398_bases ATGCAAAATCTTTTACTCTATATAAAAAATAACCTAACTCCAACCCTAGCTCAAATTCTTTTACAAGCTTTAAAAAATTC GAATAATGAAAAATTTTTTACCTTTGTTTTGAAAAATATTGAAACAATTTGCACTTGGCTCAATTCTAACGAATTTAGGG ATAGATATTTATCAACAAAACATCCTTATCCACCTTTAATCAATCCTAATTTTATAGAAATAGATTCTAGTCGACATTGC GCAGAATTAGCTTGGGATTTAAATTTACCCCTACCTAAACACTATAAATTTATCTATATTTCTCCACATGGCGTTGGAGC AGCAGCATTTTTAAGATACCTTAATCAATGTTGCGATGTAACTTGTTTTGCCTCCTGGGTTTTACCACCTGATAGCAAAG AGAGATATTGTATTAATTACATGTGTCTAAATGATAATACAATTGCTCAATATGCTATTAATATATCAGAAATTAATCTA CCTTATTTTGATAAATATCTATCTTTATTAGATTTTAATTCTAAGATTATTTGCGGAGTTCGAGATCCAATAGGACTTTT AAAGCATAGCTGGGGAAGAGATTGGAGTAAAGTTTTAAGAAACTATCCCCCTGAATTTAATCTAACTTATGATTGGCGTT ATTACATCAACTATCTTACTCATCAAAATCATAAAATTAAAATCGATATAAATGAACTACAACAAGGAGTTTTTATCATC TCTTATTTATTAAAATATTTTAACAAAGACAATGTATACTATCTTGATATGGAAGAAATCCGCCAATCAAAGGCCTTCGA TACCATGAATTTACTTGCTATAAATTTTAATTTTATCCCCCCCCCCCATAAAGATAAATTAGATTTATTTAAAATTAAAG AATTTAGAGGTTATATTCGCTATCTTTTTCCTATTACACTTTATGCAAATTCTAAAGATATTAATAACACCTTTTATCTC AATACTCCTAAAAATAATAAAAATTTCAATATTGATAGAACTTCTAGCATTCCCATAATTTTAGACAGAAAACATATCAA TCATGAAAAAATAGACATAATACAAGAAATTATAAAAAACGACCTATGTAATGATATGGGTGTATATATTGATAAAAATG ATTTTAAGCAATTAGAACAAAACAATCTTTTATTTTCAACAATTAAACATTATTTGTATGATTTTTTATATCAAATTAAA ATAACCATAGATGAAACAGAATCAAAAATGATGAAAGAAAAAGATGTAATAGATTATTTTATAAAAAATAAATCACTTAT TTACACTTTTTTTAATATATTTGAAAATGAACTAAATCATTTAAAACAAACACATCCTCATATTATTGATTCTTGGAAAT ATTATAAAGAATTTGAAAAAATATACAAAGATAAATAA
Upstream 100 bases:
>100_bases TTGCTTTAATTAAAGTTTATTTTTGATAATATATTTAAATTTCATGACATTTAAATATTTATGAATTATATATAAATTAA ATACAATTAAAAGAGGTTAT
Downstream 100 bases:
>100_bases TCATATCACTTACACAAAATCAATAGGATCAATATCCGCACTTGCATTTTTAAATTGCAAAATATAATTTTCAATTGCCA CTAAAGCTTTATGATTTTCA
Product: invasion phenotype protein
Products: NA
Alternate protein names: Invasion Phenotype Protein; Glycosyltransferase
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTWLNSNEFRDRYLSTKHPYPPLINPNFIEIDSSRHC AELAWDLNLPLPKHYKFIYISPHGVGAAAFLRYLNQCCDVTCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINL PYFDKYLSLLDFNSKIICGVRDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLTHQNHKIKIDINELQQGVFII SYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFIPPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYL NTPKNNKNFNIDRTSSIPIILDRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIK ITIDETESKMMKEKDVIDYFIKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFEKIYKDK
Sequences:
>Translated_465_residues MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTWLNSNEFRDRYLSTKHPYPPLINPNFIEIDSSRHC AELAWDLNLPLPKHYKFIYISPHGVGAAAFLRYLNQCCDVTCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINL PYFDKYLSLLDFNSKIICGVRDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLTHQNHKIKIDINELQQGVFII SYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFIPPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYL NTPKNNKNFNIDRTSSIPIILDRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIK ITIDETESKMMKEKDVIDYFIKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFEKIYKDK >Mature_465_residues MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTWLNSNEFRDRYLSTKHPYPPLINPNFIEIDSSRHC AELAWDLNLPLPKHYKFIYISPHGVGAAAFLRYLNQCCDVTCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINL PYFDKYLSLLDFNSKIICGVRDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLTHQNHKIKIDINELQQGVFII SYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFIPPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYL NTPKNNKNFNIDRTSSIPIILDRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIK ITIDETESKMMKEKDVIDYFIKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFEKIYKDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55768; Mature: 55768
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTWLNSNEFRDRYLSTK CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCC HPYPPLINPNFIEIDSSRHCAELAWDLNLPLPKHYKFIYISPHGVGAAAFLRYLNQCCDV CCCCCCCCCCEEEECCCCCHHHHEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCE TCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINLPYFDKYLSLLDFNSKIICGV EEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEC RDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLTHQNHKIKIDINELQQGVFII CCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHEEEEHHCCCCCEEEEEHHHHHHHHHHH SYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFIPPPHKDKLDLFKIKEFRGYIR HHHHHHHCCCCEEEEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHE YLFPITLYANSKDINNTFYLNTPKNNKNFNIDRTSSIPIILDRKHINHEKIDIIQEIIKN EEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH DLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIKITIDETESKMMKEKDVIDYF HCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHH IKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFEKIYKDK HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETICTWLNSNEFRDRYLSTK CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHCCCC HPYPPLINPNFIEIDSSRHCAELAWDLNLPLPKHYKFIYISPHGVGAAAFLRYLNQCCDV CCCCCCCCCCEEEECCCCCHHHHEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCE TCFASWVLPPDSKERYCINYMCLNDNTIAQYAINISEINLPYFDKYLSLLDFNSKIICGV EEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEC RDPIGLLKHSWGRDWSKVLRNYPPEFNLTYDWRYYINYLTHQNHKIKIDINELQQGVFII CCHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHEEEEHHCCCCCEEEEEHHHHHHHHHHH SYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFIPPPHKDKLDLFKIKEFRGYIR HHHHHHHCCCCEEEEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHE YLFPITLYANSKDINNTFYLNTPKNNKNFNIDRTSSIPIILDRKHINHEKIDIIQEIIKN EEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH DLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIKITIDETESKMMKEKDVIDYF HCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHH IKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFEKIYKDK HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA