| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57236986
Identifier: 57236986
GI number: 57236986
Start: 714913
End: 715350
Strand: Direct
Name: 57236986
Synonym: CJE0781
Alternate gene names: NA
Gene position: 714913-715350 (Clockwise)
Preceding gene: 57236985
Following gene: 57236987
Centisome position: 40.21
GC content: 26.48
Gene sequence:
>438_bases ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
Upstream 100 bases:
>100_bases GCTTTGTAGATGCGTTTGTTAAAAAAAGTTATGAAAATTATATTCTAGAAAGAGAACTTAAGAAACTAATAAAAGCAATC AATGAAGAACTCCCGACAAA
Downstream 100 bases:
>100_bases GATATTATGAACTTGCAATTTGTGGTTTGTATTTGGATAATTTAACTTTTCATAGTTTTGATGAAATCAAACCTTTAACA CAAGTATTAGTGGATTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Sequences:
>Translated_145_residues MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI >Mature_145_residues MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16766; Mature: 16766
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKE HCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCHHEEEECHHH MVEFIYDSKEGLLKCIGSSRCKDLI HHHHHHCCHHHHHHHHCCHHHCCCC >Mature Secondary Structure MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKE HCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCHHEEEECHHH MVEFIYDSKEGLLKCIGSSRCKDLI HHHHHHCCHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA