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The map label for this gene is lpsA [H]

Identifier: 57236901

GI number: 57236901

Start: 1762560

End: 1763495

Strand: Direct

Name: lpsA [H]

Synonym: CJE1884

Alternate gene names: 57236901

Gene position: 1762560-1763495 (Clockwise)

Preceding gene: 57236900

Following gene: 57236902

Centisome position: 99.14

GC content: 23.82

Gene sequence:

>936_bases
ATGAATTTAAGAGGAATAGGAATATCTTTTATACCAAGATATTTTTTTCAAATAAATTTAGATAAAATTTTTAATGATAT
TTTAAAATACAATATTAAAGACTTAGAAGAAATACAAACTCGAGTTAAATATTATAATCAAATAAATGAATTTTTTACAC
CTACAGCAAAGGAAAAAATAGGAAAATTTCCTTTTAAAAGTACCTCTTATGCTTTTGATGCTTATGAAGTCAGTAAATAC
TTCAAAGATGAATTTTTATGGAATAAAGAATTTGGCGATGTAAGACATACTTTTAAAGAAGCAACTATTTGCAAATCGAG
ATCTTTGGAAAATAATATAAATAATATTTTATTAAAACTTGATAAAAATAGGCACTTTTGCTTTTTAAAAGATAACATAA
ACTATGAAAATAAAAAGGATATAGCAATATTTAGAGGAGCAGTATATCAAAATCATCGAAAAGAATTTTTTGATTCTTAT
TTTGGTAGAACTTTTTGCGATATAGGAGATACTTCAAAACAACCTAGCCAATGGAAAAAAAACTTTTTAAACAAAAAAGA
ACAAATGAAATATAAATTTATAATTTCTTTAGAGGGTAACGATGTAGCAAGCAACTTAAAATGGGCTATGAATTCTAATT
CTTTAGTTTTAGCTCCAAAAATAACTTGCGAAACTTGGTTTATGGAAGGAACTTTAAAACCAAATTATCACTTTGCTTTG
ATTGATAATGAGAATTTGTCAGCAGTAATTGAATATTTTAAAAATCGCCCAAAAGATGCATTGGAAATTATTAATAATGC
TCATCAATATATTAAGAAATTTTTAGATAAGAAAAAAGAATTCCATATAGGAATTTTGGTTTTGACCAAATATTTTTATT
ATTCTAGACAACTTGAACTTAACAAAAAAAGAGATATTTTAGAATTAATCAAATAG

Upstream 100 bases:

>100_bases
GTCAAAAGTTATTTTATTGTTTATAAATTCTTAAATTTTTGATAAAATATTAAAAATTTTATTTATTAGGTTTTTTATAA
TGCTACAATCAAGACTTTTG

Downstream 100 bases:

>100_bases
TAAAATTACTCTCATTAATTCTCTAATTTTTCATAAAAAATAAATCTTTTTATACATATATTACATCATAAATTAAAAAT
TTGATTTTAGTTTTCAGCCA

Product: lipopolysaccharide core biosynthesis protien

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNLRGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYYNQINEFFTPTAKEKIGKFPFKSTSYAFDAYEVSKY
FKDEFLWNKEFGDVRHTFKEATICKSRSLENNINNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEFFDSY
FGRTFCDIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFAL
IDNENLSAVIEYFKNRPKDALEIINNAHQYIKKFLDKKKEFHIGILVLTKYFYYSRQLELNKKRDILELIK

Sequences:

>Translated_311_residues
MNLRGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYYNQINEFFTPTAKEKIGKFPFKSTSYAFDAYEVSKY
FKDEFLWNKEFGDVRHTFKEATICKSRSLENNINNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEFFDSY
FGRTFCDIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFAL
IDNENLSAVIEYFKNRPKDALEIINNAHQYIKKFLDKKKEFHIGILVLTKYFYYSRQLELNKKRDILELIK
>Mature_311_residues
MNLRGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYYNQINEFFTPTAKEKIGKFPFKSTSYAFDAYEVSKY
FKDEFLWNKEFGDVRHTFKEATICKSRSLENNINNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEFFDSY
FGRTFCDIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFAL
IDNENLSAVIEYFKNRPKDALEIINNAHQYIKKFLDKKKEFHIGILVLTKYFYYSRQLELNKKRDILELIK

Specific function: Involved in lipopolysaccharide core biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 90 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006598 [H]

Pfam domain/function: PF05686 DUF821 [H]

EC number: NA

Molecular weight: Translated: 37260; Mature: 37260

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYYNQINEFFTPTAKEKI
CCCCCCCHHHHHHHHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GKFPFKSTSYAFDAYEVSKYFKDEFLWNKEFGDVRHTFKEATICKSRSLENNINNILLKL
CCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEFFDSYFGRTFCDIGDTSKQPSQWKK
ECCCCEEEEECCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHH
NFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFAL
HHHCHHHCCEEEEEEEECCCCHHCCCCEEECCCCEEEECCCEEEEEEEECCCCCCEEEEE
IDNENLSAVIEYFKNRPKDALEIINNAHQYIKKFLDKKKEFHIGILVLTKYFYYSRQLEL
EECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
NKKRDILELIK
CHHHHHHHHHC
>Mature Secondary Structure
MNLRGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYYNQINEFFTPTAKEKI
CCCCCCCHHHHHHHHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GKFPFKSTSYAFDAYEVSKYFKDEFLWNKEFGDVRHTFKEATICKSRSLENNINNILLKL
CCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEFFDSYFGRTFCDIGDTSKQPSQWKK
ECCCCEEEEECCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHH
NFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFAL
HHHCHHHCCEEEEEEEECCCCHHCCCCEEECCCCEEEECCCEEEEEEEECCCCCCEEEEE
IDNENLSAVIEYFKNRPKDALEIINNAHQYIKKFLDKKKEFHIGILVLTKYFYYSRQLEL
EECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
NKKRDILELIK
CHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7539688 [H]