| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is yqgH [H]
Identifier: 57235019
GI number: 57235019
Start: 136921
End: 137781
Strand: Direct
Name: yqgH [H]
Synonym: DET0139
Alternate gene names: 57235019
Gene position: 136921-137781 (Clockwise)
Preceding gene: 57235020
Following gene: 57235018
Centisome position: 9.32
GC content: 51.34
Gene sequence:
>861_bases ATGTTGCCGAGATATTTTACTGATAAATTAGCCAAATACGGGGTTCTTATTACCGCCCTTGTCTCCATACTGGTACTGCT GGCTATTGCGGTATTTATCATTCAGGGGGGGCTGCCCTTATTCAGCGCAGTAAACCCCTTTGATTTCCTGTTCGGACAGA GCTGGAGCCCCACCTATGACGAATACGGCATATTATCCATGATAGTGGGTTCTCTGCTGGTTACTCTGGGGTCAATGGTG ATTGCAGTGCCGCTGGGTATTGCCTGTGCTATTTTGCTGGCAGAGGTTGCCCCCCAAAGGGTGCGTAATTTGCTTCGTCC GGCAGTTGAGCTGCTGGTGGGTATTCCCTCTGTGGTTTATGGTCTGGTAGGTATAATGGTAATTGTACCGGCCATTAGAA ATCTGGGGGGTACGGGCTATTCCGTACTGGCGGCAGTGCTGGTGCTTTCAATCATGGTCTTACCCACTATTATCAGCATC TCCGAAGACAGCCTCCGGGCTGTGCCCCGCACTTACCGGGATGGGTCTTTGGCACTGGGTGCCAGCCAATGGCAGACTAT CTGGCACATGCTGCTGCCGGCTGCCCGCTCAGGGGTAGGGGCAAGCATAGTGCTGGGTATGGGCAGAGCCATCGGCGAAA CTATGGCTATGATTATGGTCATAGGAAATGCGGTTATTATTCCTACTTCTCCCCTTGATCCGGCCAGAACGCTGACCGGC AATATTGCGGTAGAGATAAATTATGCGGCAGGCCTGCATGAAAATGCCCTTTTTGCCACCGGTTTGGTGCTCCTTATCTT GATACTTATACTAAATAGTTTGGCCACTCTGGCGCTGAAGCGGGGTGAACAACATGCTTAA
Upstream 100 bases:
>100_bases AAGAAGGTTACTTATCTGTAAACTAAGCCCGGGTCGGGTAAATTAGGTAATCACAATGGGCAGAGACCAAAAATCTCTGC CCGGACTGGTTTAAAGGGAA
Downstream 100 bases:
>100_bases ATTTTCCTCCCGCAGTACCCAGAAAGTGGCATTTACAATATTATGGGCGGCAGGCATTATTACTTTGCTAGTTCTGCTGC TTATCATAGGTTATATTATT
Product: phosphate ABC transporter, permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MLPRYFTDKLAKYGVLITALVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYDEYGILSMIVGSLLVTLGSMV IAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAIRNLGGTGYSVLAAVLVLSIMVLPTIISI SEDSLRAVPRTYRDGSLALGASQWQTIWHMLLPAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTSPLDPARTLTG NIAVEINYAAGLHENALFATGLVLLILILILNSLATLALKRGEQHA
Sequences:
>Translated_286_residues MLPRYFTDKLAKYGVLITALVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYDEYGILSMIVGSLLVTLGSMV IAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAIRNLGGTGYSVLAAVLVLSIMVLPTIISI SEDSLRAVPRTYRDGSLALGASQWQTIWHMLLPAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTSPLDPARTLTG NIAVEINYAAGLHENALFATGLVLLILILILNSLATLALKRGEQHA >Mature_286_residues MLPRYFTDKLAKYGVLITALVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYDEYGILSMIVGSLLVTLGSMV IAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVYGLVGIMVIVPAIRNLGGTGYSVLAAVLVLSIMVLPTIISI SEDSLRAVPRTYRDGSLALGASQWQTIWHMLLPAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTSPLDPARTLTG NIAVEINYAAGLHENALFATGLVLLILILILNSLATLALKRGEQHA
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=292, Percent_Identity=31.5068493150685, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790163, Length=248, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30163; Mature: 30163
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRYFTDKLAKYGVLITALVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCCH EYGILSMIVGSLLVTLGSMVIAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLVGIMVIVPAIRNLGGTGYSVLAAVLVLSIMVLPTIISISEDSLRAVPRTYRDGSLALG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEC ASQWQTIWHMLLPAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTSPLDPARTLTG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCC NIAVEINYAAGLHENALFATGLVLLILILILNSLATLALKRGEQHA CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLPRYFTDKLAKYGVLITALVSILVLLAIAVFIIQGGLPLFSAVNPFDFLFGQSWSPTYD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCCH EYGILSMIVGSLLVTLGSMVIAVPLGIACAILLAEVAPQRVRNLLRPAVELLVGIPSVVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLVGIMVIVPAIRNLGGTGYSVLAAVLVLSIMVLPTIISISEDSLRAVPRTYRDGSLALG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEC ASQWQTIWHMLLPAARSGVGASIVLGMGRAIGETMAMIMVIGNAVIIPTSPLDPARTLTG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCC NIAVEINYAAGLHENALFATGLVLLILILILNSLATLALKRGEQHA CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]