| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is phoU [H]
Identifier: 57235016
GI number: 57235016
Start: 139394
End: 140059
Strand: Direct
Name: phoU [H]
Synonym: DET0142
Alternate gene names: 57235016
Gene position: 139394-140059 (Clockwise)
Preceding gene: 57235017
Following gene: 57235015
Centisome position: 9.48
GC content: 48.65
Gene sequence:
>666_bases ATGCCGCGAATGGGATTTGACCGCCACCTTAGGGAACTTGAGGATGATATGCTCCTTTTGGGTAGCATGGTAGGCAAGGC TGTTGACCGCTCTATGCAGTCTATGAAAGAGCGGGATTTGGAGCTGGCCAAACAGGTTATAGAAGAAGACAAACTTATTA ACCAAAAACGCTTTGAGATAGAAGAAAAAAGCGTAGAGCTTATGGCTACCCAGCAGCCGATGGCCCGCGACTTAAGGATA ATAGTAGCTGTACTTAACATAATAGTTGACCTTGAAAGAATTGGCGACCATGCCGAAGGTAATGCTAAAATAGCCCTGAT GCTGGGTGAAGAGCCGCCTTTAAAGCCGCTCATTGACCTGCCCCGCATGGCCTCCAAAACAGAGGAAATGCTAAACCGGG CGCTGGGGGCTTTTGTCCGGCGTGATTCCGCCGAAGCTTTGCGGGTAATAGACGAAGATGACGAAGTAGACGGCCTGTAT AACCAGATTTTCCGGGAACTGCTGGTTTTTATGGCCGAAGACCCCCATACTATCTCCCGGGCAACCCGCCTTATCTGGGC AGCCCATAATCTGGAAAGGAGTGCGGACCGGGTTACCAATATTTGCGAAAGGGTACTCTTTGTGATTACTGGTAAATCTG AAGAGTTTGGTTCATCAAAGTACTAA
Upstream 100 bases:
>100_bases CCTGATTGAATACGGGCGTACCGGTGAGATTTTTTCCCGTCCCAAGGACAAACGCACCGAAGACTATATTACCGGCCGGT TCGGTTAGAGGAGAGTTATT
Downstream 100 bases:
>100_bases TATGGAAAATAAAAAACAGATATTGTTCGTGTGTTTGCATAATGCCGGCCGTTCTCAGGCCGCCGAAGTTATCTTTAATC ATCTGGCCGGGGGTAAGGCT
Product: phosphate transport system regulatory protein PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MPRMGFDRHLRELEDDMLLLGSMVGKAVDRSMQSMKERDLELAKQVIEEDKLINQKRFEIEEKSVELMATQQPMARDLRI IVAVLNIIVDLERIGDHAEGNAKIALMLGEEPPLKPLIDLPRMASKTEEMLNRALGAFVRRDSAEALRVIDEDDEVDGLY NQIFRELLVFMAEDPHTISRATRLIWAAHNLERSADRVTNICERVLFVITGKSEEFGSSKY
Sequences:
>Translated_221_residues MPRMGFDRHLRELEDDMLLLGSMVGKAVDRSMQSMKERDLELAKQVIEEDKLINQKRFEIEEKSVELMATQQPMARDLRI IVAVLNIIVDLERIGDHAEGNAKIALMLGEEPPLKPLIDLPRMASKTEEMLNRALGAFVRRDSAEALRVIDEDDEVDGLY NQIFRELLVFMAEDPHTISRATRLIWAAHNLERSADRVTNICERVLFVITGKSEEFGSSKY >Mature_220_residues PRMGFDRHLRELEDDMLLLGSMVGKAVDRSMQSMKERDLELAKQVIEEDKLINQKRFEIEEKSVELMATQQPMARDLRII VAVLNIIVDLERIGDHAEGNAKIALMLGEEPPLKPLIDLPRMASKTEEMLNRALGAFVRRDSAEALRVIDEDDEVDGLYN QIFRELLVFMAEDPHTISRATRLIWAAHNLERSADRVTNICERVLFVITGKSEEFGSSKY
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=207, Percent_Identity=34.7826086956522, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25308; Mature: 25176
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRMGFDRHLRELEDDMLLLGSMVGKAVDRSMQSMKERDLELAKQVIEEDKLINQKRFEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKSVELMATQQPMARDLRIIVAVLNIIVDLERIGDHAEGNAKIALMLGEEPPLKPLIDL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHH PRMASKTEEMLNRALGAFVRRDSAEALRVIDEDDEVDGLYNQIFRELLVFMAEDPHTISR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ATRLIWAAHNLERSADRVTNICERVLFVITGKSEEFGSSKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PRMGFDRHLRELEDDMLLLGSMVGKAVDRSMQSMKERDLELAKQVIEEDKLINQKRFEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKSVELMATQQPMARDLRIIVAVLNIIVDLERIGDHAEGNAKIALMLGEEPPLKPLIDL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHH PRMASKTEEMLNRALGAFVRRDSAEALRVIDEDDEVDGLYNQIFRELLVFMAEDPHTISR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ATRLIWAAHNLERSADRVTNICERVLFVITGKSEEFGSSKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]