| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234877
Identifier: 57234877
GI number: 57234877
Start: 338433
End: 339533
Strand: Direct
Name: 57234877
Synonym: DET0355
Alternate gene names: NA
Gene position: 338433-339533 (Clockwise)
Preceding gene: 57234878
Following gene: 57234876
Centisome position: 23.03
GC content: 50.95
Gene sequence:
>1101_bases GTGCCTACCAGCATGAGCAGTGAATTTGGCTTTGCTATGGAACATGACGGGCAGTATGTATATCTGGACGGGGTGAACCG TATTTACCGTGCCAAAATTGCCCAGAGCAGTTTGGAAATAGGGGCAGATATACTTAAGTTTGAAACTGTCTGCGACAGCC TGAGCGGCAGTTTGACAGTAGAGCTGGATAACTCAAGCGGCCGTTATAACCGGGCGGGCAGTGGCGAGCTGGATATGCTT ACCCCCGGCAGTGAAATCCAGTTTTCCCCCGGCTGCGGGACAGACAACGGTAACGAATACGGGCCGGGTCAGTTATATGT TATCCAAAGTTTGGAAAAGCGTATTTCGGGCGGTAAATCAAGCCTGTTGATACGGGCGGAGGATACTTTTTGCCGTTTGA AAAGGTGGCGGGCAACCAACCAGATGCGCTGGAACCGCAGTTCCTCTCAGCTTTCGGTCAGAGGGATACTGGGGTATGTC TTAAGCAAAGCGGGTATCCGCATGGAAGTGCTGAGCGCATCCGCCCAGCTGGATAGTTTTTACCCGGATTTTACTATACA CGTAGGTGATGACGGGTATGAGCTGCTGGAGAAGCTGCTTAGTTTTGTGCCTGATTTGGTCTTTTTGCAGGGCCACTGCA TTTACTGCGTTTATCCCCGGGAAACAGACAGCCCGGTGTACAGTTACGGGCTTAATCACCCTGTATTCAGCGGAGTTTAT GCGGATACTTTTTCCGAAGTAAACCGGGTGGTGCTGGAAGGGGTGGATTCTTCTTCCCGTATCTTTATGGTTCAGGGCTT CCTCTGGGATGAGATTTACCAGAACCATGACCGTACTCTAAGGATTTATGACCGCAACATAAACACACTTGCCCAGGCAA GGGAAAGGCTGGATAGCTATTTCAGAAAAGCGGCATTGAAACAGCAAACGGGGCGGATAGTGACGCCCGTAAATTGCGGG CAGCAGCTTTTTGACGTGGTAAGAATCAGCCAGCCGGAAAGCGGTCTGGAAGGGCTGGTCCGGCGCATTAACGGTATCCG TGTGGTTTACGAGCCGGGCAAAGGAATATACCGCCAGGAATTAAGTTTGGGAAAGGTGTAA
Upstream 100 bases:
>100_bases TTATCTGGAAAGCTATACCGGCAGTGTGGCAGATAAACGGGCATTCCTGAGCCATCTGGTAGCGGATAACAGTTTTAGTG ATAATATCTGGTGCGAAAGC
Downstream 100 bases:
>100_bases TTAAATATAAAATGGAGATAAAACGGGCAGTCCTGAAGGTTTTTAATTCTGTAGCTTATACCGCCTCTATCCAGCTGGCG GGTGATTATAAATCTATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPTSMSSEFGFAMEHDGQYVYLDGVNRIYRAKIAQSSLEIGADILKFETVCDSLSGSLTVELDNSSGRYNRAGSGELDML TPGSEIQFSPGCGTDNGNEYGPGQLYVIQSLEKRISGGKSSLLIRAEDTFCRLKRWRATNQMRWNRSSSQLSVRGILGYV LSKAGIRMEVLSASAQLDSFYPDFTIHVGDDGYELLEKLLSFVPDLVFLQGHCIYCVYPRETDSPVYSYGLNHPVFSGVY ADTFSEVNRVVLEGVDSSSRIFMVQGFLWDEIYQNHDRTLRIYDRNINTLAQARERLDSYFRKAALKQQTGRIVTPVNCG QQLFDVVRISQPESGLEGLVRRINGIRVVYEPGKGIYRQELSLGKV
Sequences:
>Translated_366_residues MPTSMSSEFGFAMEHDGQYVYLDGVNRIYRAKIAQSSLEIGADILKFETVCDSLSGSLTVELDNSSGRYNRAGSGELDML TPGSEIQFSPGCGTDNGNEYGPGQLYVIQSLEKRISGGKSSLLIRAEDTFCRLKRWRATNQMRWNRSSSQLSVRGILGYV LSKAGIRMEVLSASAQLDSFYPDFTIHVGDDGYELLEKLLSFVPDLVFLQGHCIYCVYPRETDSPVYSYGLNHPVFSGVY ADTFSEVNRVVLEGVDSSSRIFMVQGFLWDEIYQNHDRTLRIYDRNINTLAQARERLDSYFRKAALKQQTGRIVTPVNCG QQLFDVVRISQPESGLEGLVRRINGIRVVYEPGKGIYRQELSLGKV >Mature_365_residues PTSMSSEFGFAMEHDGQYVYLDGVNRIYRAKIAQSSLEIGADILKFETVCDSLSGSLTVELDNSSGRYNRAGSGELDMLT PGSEIQFSPGCGTDNGNEYGPGQLYVIQSLEKRISGGKSSLLIRAEDTFCRLKRWRATNQMRWNRSSSQLSVRGILGYVL SKAGIRMEVLSASAQLDSFYPDFTIHVGDDGYELLEKLLSFVPDLVFLQGHCIYCVYPRETDSPVYSYGLNHPVFSGVYA DTFSEVNRVVLEGVDSSSRIFMVQGFLWDEIYQNHDRTLRIYDRNINTLAQARERLDSYFRKAALKQQTGRIVTPVNCGQ QLFDVVRISQPESGLEGLVRRINGIRVVYEPGKGIYRQELSLGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41087; Mature: 40956
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSMSSEFGFAMEHDGQYVYLDGVNRIYRAKIAQSSLEIGADILKFETVCDSLSGSLTV CCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ELDNSSGRYNRAGSGELDMLTPGSEIQFSPGCGTDNGNEYGPGQLYVIQSLEKRISGGKS EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCC SLLIRAEDTFCRLKRWRATNQMRWNRSSSQLSVRGILGYVLSKAGIRMEVLSASAQLDSF EEEEEECHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHCCCCEEEEHHHHHHHHHC YPDFTIHVGDDGYELLEKLLSFVPDLVFLQGHCIYCVYPRETDSPVYSYGLNHPVFSGVY CCCEEEEECCCHHHHHHHHHHHCCHHEEECCCEEEEEECCCCCCCHHCCCCCCCHHHHHH ADTFSEVNRVVLEGVDSSSRIFMVQGFLWDEIYQNHDRTLRIYDRNINTLAQARERLDSY HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH FRKAALKQQTGRIVTPVNCGQQLFDVVRISQPESGLEGLVRRINGIRVVYEPGKGIYRQE HHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHH LSLGKV HCCCCC >Mature Secondary Structure PTSMSSEFGFAMEHDGQYVYLDGVNRIYRAKIAQSSLEIGADILKFETVCDSLSGSLTV CCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE ELDNSSGRYNRAGSGELDMLTPGSEIQFSPGCGTDNGNEYGPGQLYVIQSLEKRISGGKS EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCC SLLIRAEDTFCRLKRWRATNQMRWNRSSSQLSVRGILGYVLSKAGIRMEVLSASAQLDSF EEEEEECHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHCCCCEEEEHHHHHHHHHC YPDFTIHVGDDGYELLEKLLSFVPDLVFLQGHCIYCVYPRETDSPVYSYGLNHPVFSGVY CCCEEEEECCCHHHHHHHHHHHCCHHEEECCCEEEEEECCCCCCCHHCCCCCCCHHHHHH ADTFSEVNRVVLEGVDSSSRIFMVQGFLWDEIYQNHDRTLRIYDRNINTLAQARERLDSY HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHH FRKAALKQQTGRIVTPVNCGQQLFDVVRISQPESGLEGLVRRINGIRVVYEPGKGIYRQE HHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHH LSLGKV HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA