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The map label for this gene is rsmI [H]

Identifier: 57234816

GI number: 57234816

Start: 367041

End: 367865

Strand: Direct

Name: rsmI [H]

Synonym: DET0386

Alternate gene names: 57234816

Gene position: 367041-367865 (Clockwise)

Preceding gene: 57234817

Following gene: 57234815

Centisome position: 24.97

GC content: 52.12

Gene sequence:

>825_bases
ATGGCTTTATATGTGGTGGCAACGCCTATAGGTAATCTGGAGGATATAACCCTCCGGGCACTGCGTGTGCTTTCAGAGGT
AAAGCTGATTGCAGCGGAGGATACCCGCCGTACCCGTAAACTGCTTTCCGCCCATAATATAAAGACCCCCCTGACCAGTT
ACTTTGAGCATAACCGCCTGTCAAAGCTGGATTATATTCTGGAGGTGCTGGGGGAGGGGGATGTGGCTTTGGTTTCAGAT
GCCGGTATGCCCGGTATTTCAGACCCCGGTTACGAGCTTATAAAGGCTGCTCATGAGCACGGCATAAAGGTTGTGCCGGT
GCCGGGGGCTTCGGCCGTGATAACAGCGGTGGCGGTATCCGGGCTGGACTGTGCCAGTTTCAGCTATCTGGGGTTTCTGC
CCCGCCAGAAAACTGAACGCCGGAAAGCCCTTTCGGAAGCGGCATCACTTGGTGCAAGCATTGTTATACTGGAAGCACCC
CACCGTTTGCAGGGCTGTTTGCTTGACATAAAAGATGTGCTGGGAGACCGTGAGATAGCCGTCTGCCGTGAGCTTACCAA
AATATATGAAGAAATATTCCGGGGCAGTATCAGCCAGGCTATCAGCCATTTTGACCAGCCGCGGGGTGAATTTGTGCTGG
TGGTGGAGGGCTGTAAAGTGCCCGTGTCTCAGCCGGAGCTGACGGATGATATAATAAAGGAACTGGGCATGCTCAAAAAA
CAGGGCAAACCGGCTAAAGAAGCGGTGGCTCTGGTGAGCCAAAAAAGCGGTCTGCCCAAAAAAGAAATCTACCGGGCTTG
GCTTAAAATTAACAAAACCTTATAA

Upstream 100 bases:

>100_bases
GGCGGGGTGTTATCACCCTTTTATTATACAGTATTTCGGGATTTGGTTTTTTTCTTAGCCAGTTTAGCCTTCAGGCTTAT
TCTGCTACAATAATAAGGTT

Downstream 100 bases:

>100_bases
TAGGTAAAATTTGCGAGGTGTTTCATGAGGAGAGGATGTATTTCACTGGGGGATGTGGTTTGCACTGGCTGCAACAATAA
TATTCCCTATCCTGAGCGTT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MALYVVATPIGNLEDITLRALRVLSEVKLIAAEDTRRTRKLLSAHNIKTPLTSYFEHNRLSKLDYILEVLGEGDVALVSD
AGMPGISDPGYELIKAAHEHGIKVVPVPGASAVITAVAVSGLDCASFSYLGFLPRQKTERRKALSEAASLGASIVILEAP
HRLQGCLLDIKDVLGDREIAVCRELTKIYEEIFRGSISQAISHFDQPRGEFVLVVEGCKVPVSQPELTDDIIKELGMLKK
QGKPAKEAVALVSQKSGLPKKEIYRAWLKINKTL

Sequences:

>Translated_274_residues
MALYVVATPIGNLEDITLRALRVLSEVKLIAAEDTRRTRKLLSAHNIKTPLTSYFEHNRLSKLDYILEVLGEGDVALVSD
AGMPGISDPGYELIKAAHEHGIKVVPVPGASAVITAVAVSGLDCASFSYLGFLPRQKTERRKALSEAASLGASIVILEAP
HRLQGCLLDIKDVLGDREIAVCRELTKIYEEIFRGSISQAISHFDQPRGEFVLVVEGCKVPVSQPELTDDIIKELGMLKK
QGKPAKEAVALVSQKSGLPKKEIYRAWLKINKTL
>Mature_273_residues
ALYVVATPIGNLEDITLRALRVLSEVKLIAAEDTRRTRKLLSAHNIKTPLTSYFEHNRLSKLDYILEVLGEGDVALVSDA
GMPGISDPGYELIKAAHEHGIKVVPVPGASAVITAVAVSGLDCASFSYLGFLPRQKTERRKALSEAASLGASIVILEAPH
RLQGCLLDIKDVLGDREIAVCRELTKIYEEIFRGSISQAISHFDQPRGEFVLVVEGCKVPVSQPELTDDIIKELGMLKKQ
GKPAKEAVALVSQKSGLPKKEIYRAWLKINKTL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=273, Percent_Identity=42.1245421245421, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29919; Mature: 29788

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYVVATPIGNLEDITLRALRVLSEVKLIAAEDTRRTRKLLSAHNIKTPLTSYFEHNRL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SKLDYILEVLGEGDVALVSDAGMPGISDPGYELIKAAHEHGIKVVPVPGASAVITAVAVS
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHC
GLDCASFSYLGFLPRQKTERRKALSEAASLGASIVILEAPHRLQGCLLDIKDVLGDREIA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHH
VCRELTKIYEEIFRGSISQAISHFDQPRGEFVLVVEGCKVPVSQPELTDDIIKELGMLKK
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
QGKPAKEAVALVSQKSGLPKKEIYRAWLKINKTL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALYVVATPIGNLEDITLRALRVLSEVKLIAAEDTRRTRKLLSAHNIKTPLTSYFEHNRL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SKLDYILEVLGEGDVALVSDAGMPGISDPGYELIKAAHEHGIKVVPVPGASAVITAVAVS
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHC
GLDCASFSYLGFLPRQKTERRKALSEAASLGASIVILEAPHRLQGCLLDIKDVLGDREIA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHH
VCRELTKIYEEIFRGSISQAISHFDQPRGEFVLVVEGCKVPVSQPELTDDIIKELGMLKK
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
QGKPAKEAVALVSQKSGLPKKEIYRAWLKINKTL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]