| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234808
Identifier: 57234808
GI number: 57234808
Start: 389417
End: 389968
Strand: Direct
Name: 57234808
Synonym: DET0412
Alternate gene names: NA
Gene position: 389417-389968 (Clockwise)
Preceding gene: 57234809
Following gene: 57234807
Centisome position: 26.5
GC content: 47.83
Gene sequence:
>552_bases ATGAAGGTAATTGCCCTGGTGGGCATGCCGGGGGCGGGTAAGACCGAGGCCTCGCGTATGTTCAGTAAAAACGGTTTTAT ACGGATACGTTTCGGAGACATTACTGATGAGAAACTTCGGGAGCTTGGGCTGCCCCTGAACGAGGAAAATGAACGCAAGG TGCGGGAATCGCTCCGTAAGCAGTACGGCATGGAGGCTTATGCGGTGCTGAACCTTAGCCGTATTGATGAAAACCTGAAG AAAGACAACGTGGTGGTAGACGGGCTGTATTCGTGGGAAGAGTACAAGTTTTTAAAGAGCTACTATAAAGACAAGCTGAT AGTCCTTGCCATTTCTTCTTCACCCGCCACCCGGTATTCCCGTTTGTGCGAAAGGGCAGACCGCCCTTTGAATTATGAAA ATGCCGTTTCCCGTGATTACTCTGAAATAGAAAATATAAACAAGGCCGGGCCGATTGTCATGGCGGATATTACCCTTCTT AACGAACTGGATTTAAAAGATATGGAAAAACAGGTAAAGAAGCTTAGCTTGGAACTGCGGGCAGACGTATGA
Upstream 100 bases:
>100_bases CGCCTTTTATATAGCTACCCTGTTCAGCATGAAACGCCGGGTTATGGAATAACCCTTTAGGTAGTCTGGAGTTTTTGGAT AATATACAAAGGAGCGGTAG
Downstream 100 bases:
>100_bases GCCGCCCGAATGCAGACGAATATTTCCTTAAGATAGCGGCGGTGGTTGCCGAACGTTCTACCTGTGTCCGCCATCATGTC GGGGCGGTAGCCGTAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKVIALVGMPGAGKTEASRMFSKNGFIRIRFGDITDEKLRELGLPLNEENERKVRESLRKQYGMEAYAVLNLSRIDENLK KDNVVVDGLYSWEEYKFLKSYYKDKLIVLAISSSPATRYSRLCERADRPLNYENAVSRDYSEIENINKAGPIVMADITLL NELDLKDMEKQVKKLSLELRADV
Sequences:
>Translated_183_residues MKVIALVGMPGAGKTEASRMFSKNGFIRIRFGDITDEKLRELGLPLNEENERKVRESLRKQYGMEAYAVLNLSRIDENLK KDNVVVDGLYSWEEYKFLKSYYKDKLIVLAISSSPATRYSRLCERADRPLNYENAVSRDYSEIENINKAGPIVMADITLL NELDLKDMEKQVKKLSLELRADV >Mature_183_residues MKVIALVGMPGAGKTEASRMFSKNGFIRIRFGDITDEKLRELGLPLNEENERKVRESLRKQYGMEAYAVLNLSRIDENLK KDNVVVDGLYSWEEYKFLKSYYKDKLIVLAISSSPATRYSRLCERADRPLNYENAVSRDYSEIENINKAGPIVMADITLL NELDLKDMEKQVKKLSLELRADV
Specific function: Unknown
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0200 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 - InterPro: IPR022970 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 21047; Mature: 21047
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIALVGMPGAGKTEASRMFSKNGFIRIRFGDITDEKLRELGLPLNEENERKVRESLRK CEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHH QYGMEAYAVLNLSRIDENLKKDNVVVDGLYSWEEYKFLKSYYKDKLIVLAISSSPATRYS HHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH RLCERADRPLNYENAVSRDYSEIENINKAGPIVMADITLLNELDLKDMEKQVKKLSLELR HHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHC ADV CCC >Mature Secondary Structure MKVIALVGMPGAGKTEASRMFSKNGFIRIRFGDITDEKLRELGLPLNEENERKVRESLRK CEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHH QYGMEAYAVLNLSRIDENLKKDNVVVDGLYSWEEYKFLKSYYKDKLIVLAISSSPATRYS HHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH RLCERADRPLNYENAVSRDYSEIENINKAGPIVMADITLLNELDLKDMEKQVKKLSLELR HHHHHCCCCCCCHHHHHCCHHHHHCCCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHC ADV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA