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The map label for this gene is secY [H]

Identifier: 57234767

GI number: 57234767

Start: 454549

End: 455865

Strand: Direct

Name: secY [H]

Synonym: DET0494

Alternate gene names: 57234767

Gene position: 454549-455865 (Clockwise)

Preceding gene: 57234768

Following gene: 57234758

Centisome position: 30.93

GC content: 50.65

Gene sequence:

>1317_bases
ATGCGGCAGAAATCGAGTAGACCACGCCTCTTGCAGGCGATGATTGACGCTTTCAGCTTGCCTGATTTAAGGCGTCGGTT
ACTTATTACTTTGGGAATATTGGTTGCGGCACGTTTTATTGCTCATGTGCCGCTTCCTGGTGTTGATTCAGCTGCCCTGC
AGGATTTGTTCGACCAGAACGGAGCTTTGGGTATGCTGGATTTGTTTTCCGGCGGTGCTATGCGGTACTTCAGCGTGGCG
GCTCTGGGTGTTTATCCCTACATTACCGCATCCATCATCATGACTTTGCTTACGCCCGTTATCCCCAAGCTTACCGCCCT
TTCAAAAGAGGGGGAAGCCGGGCGCAATAAAATCAATACTATTACTCACTGGCTGGCAGTGCCGACAGCGGCCTTAGCCG
GTTACAGCCAGTTGCTTCTTCTGCAAAGAGAAGGGGCGGTAGCTCAGACTGAACCTTTGGCGGCAGTTGCCATAGTTTTG
TCCATTGTGGCCGGCACAATGTTTATGGTCTGGCTGGGTGAACAGATTACCAATTATGGTATTGGCAACGGTATTTCGCT
GATTATATTTGCCGGTATCGTAGCCGGTCTGCCGGATACGATTGGGCGTGGCCTGATGGCCTCTGACCAGTTTGCCGGTT
TGGCTGTATATGCTATTATGGCTCTTCTGACCACAGTTCTAATAGTTATCTTTACTGAGGCACACCGCAGGATACCTGTT
CAGTATGCCCAGACTGTTATCCGCAGCGGCAAGATGTACCGCCGCGGCGGTGAGAGCCATATACCCCTGCGGGTTAACTC
TGCCGGTATGATACCCCTTATCTTTGCGTCTGCTCTGGTGATGCTGCCCGGTCTGGTGGCCAGTTATTTCATGGCAGGCT
CAACTGAAGACCCTAACTTCTGGAATACTATTTATAATATCTTCAGTTCCAGCGCCTCCATGCCTGGAGGGTTGGTATAC
TGGGGTCTTTACTTCTTTATGACTATAATCTTTGCCTTCTTCTATACTATGGTGACCTTTGAACAGCAGGATATACCCGG
CACTCTTCAGAGGCAGGGCGGTTTTGTACCCGGCATTCGTCCCGGCAAGATGACTGACCAGTACTTAAGCGGCGTTATCG
GCCGGATTACCTGGGCTGGTGCGTTATTCCTGGGGTTTGTAGCTATTATGCCTTTCATTGCCCGTGAGGTTACCGGCATA
CAGGTTATTCAGCTATCCAGCTTCGGTATGCTGATTGTGGTCGGTGTAGCTCTGGATACTATGAAACAGCTCGAGGCGCA
GCTTGTAATGCGGCGTTACGAGGGCTTTATTAAGTAG

Upstream 100 bases:

>100_bases
GGGCATATTGACCGGGCTCTGGAAGTAAGCGCCCATAAATTTTCGCAGGCAGCCAAAGCTCAGATTGAAGCTGCTGGCGG
TAAGGTACAGGAAATAGATT

Downstream 100 bases:

>100_bases
GCAAGAATAGTGTATAATGTTATTTTCCTTGGCGCCCCGGGTTCGGGTAAAGGCACACAAGGTGAAGTAGTCGCTAAAGA
GCTTAGGCTGGCGCATATGG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MRQKSSRPRLLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAALQDLFDQNGALGMLDLFSGGAMRYFSVA
ALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINTITHWLAVPTAALAGYSQLLLLQREGAVAQTEPLAAVAIVL
SIVAGTMFMVWLGEQITNYGIGNGISLIIFAGIVAGLPDTIGRGLMASDQFAGLAVYAIMALLTTVLIVIFTEAHRRIPV
QYAQTVIRSGKMYRRGGESHIPLRVNSAGMIPLIFASALVMLPGLVASYFMAGSTEDPNFWNTIYNIFSSSASMPGGLVY
WGLYFFMTIIFAFFYTMVTFEQQDIPGTLQRQGGFVPGIRPGKMTDQYLSGVIGRITWAGALFLGFVAIMPFIAREVTGI
QVIQLSSFGMLIVVGVALDTMKQLEAQLVMRRYEGFIK

Sequences:

>Translated_438_residues
MRQKSSRPRLLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAALQDLFDQNGALGMLDLFSGGAMRYFSVA
ALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINTITHWLAVPTAALAGYSQLLLLQREGAVAQTEPLAAVAIVL
SIVAGTMFMVWLGEQITNYGIGNGISLIIFAGIVAGLPDTIGRGLMASDQFAGLAVYAIMALLTTVLIVIFTEAHRRIPV
QYAQTVIRSGKMYRRGGESHIPLRVNSAGMIPLIFASALVMLPGLVASYFMAGSTEDPNFWNTIYNIFSSSASMPGGLVY
WGLYFFMTIIFAFFYTMVTFEQQDIPGTLQRQGGFVPGIRPGKMTDQYLSGVIGRITWAGALFLGFVAIMPFIAREVTGI
QVIQLSSFGMLIVVGVALDTMKQLEAQLVMRRYEGFIK
>Mature_438_residues
MRQKSSRPRLLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAALQDLFDQNGALGMLDLFSGGAMRYFSVA
ALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINTITHWLAVPTAALAGYSQLLLLQREGAVAQTEPLAAVAIVL
SIVAGTMFMVWLGEQITNYGIGNGISLIIFAGIVAGLPDTIGRGLMASDQFAGLAVYAIMALLTTVLIVIFTEAHRRIPV
QYAQTVIRSGKMYRRGGESHIPLRVNSAGMIPLIFASALVMLPGLVASYFMAGSTEDPNFWNTIYNIFSSSASMPGGLVY
WGLYFFMTIIFAFFYTMVTFEQQDIPGTLQRQGGFVPGIRPGKMTDQYLSGVIGRITWAGALFLGFVAIMPFIAREVTGI
QVIQLSSFGMLIVVGVALDTMKQLEAQLVMRRYEGFIK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=432, Percent_Identity=38.4259259259259, Blast_Score=231, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47572; Mature: 47572

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQKSSRPRLLQAMIDAFSLPDLRRRLLITLGILVAARFIAHVPLPGVDSAALQDLFDQN
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
GALGMLDLFSGGAMRYFSVAALGVYPYITASIIMTLLTPVIPKLTALSKEGEAGRNKINT
CCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ITHWLAVPTAALAGYSQLLLLQREGAVAQTEPLAAVAIVLSIVAGTMFMVWLGEQITNYG
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGNGISLIIFAGIVAGLPDTIGRGLMASDQFAGLAVYAIMALLTTVLIVIFTEAHRRIPV
CCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QYAQTVIRSGKMYRRGGESHIPLRVNSAGMIPLIFASALVMLPGLVASYFMAGSTEDPNF
HHHHHHHHCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
WNTIYNIFSSSASMPGGLVYWGLYFFMTIIFAFFYTMVTFEQQDIPGTLQRQGGFVPGIR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
PGKMTDQYLSGVIGRITWAGALFLGFVAIMPFIAREVTGIQVIQLSSFGMLIVVGVALDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHH
MKQLEAQLVMRRYEGFIK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA